RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 TLK2Q86UE8 772 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 TMEM192Q8IY95 271 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 LRRC57Q8N9N7 239 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 CAVIN3Q969G5 261 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 COG5Q9UP83 839 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 USTQ9Y2C2 406 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 PAPPA2Q9BXP8 1791 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 CNTNAP2Q9UHC6 1331 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 GOLGA6L10A0A0M3HER8 536 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 COMTP21964 271 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 CLNS1AP54105 237 aaKnown RBP9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 LACTBP83111 547 aaPredicted RBP9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 BEX3Q00994 111 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 PREPLQ4J6C6 727 aaPredicted RBP9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 CFAP58Q5T655 872 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 ACBD5Q5T8D3 534 aaPredicted RBP9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 SEL1L2Q5TEA6 688 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 IFT20Q8IY31 132 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 USP38Q8NB14 1042 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 EZH1Q92800 747 aaPredicted RBP9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 C16orf70Q9BSU1 422 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 TRIM31Q9BZY9 425 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 TRIM7Q9C029 511 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 CCDC113Q9H0I3 377 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 DDX47Q9H0S4 455 aaKnown RBP9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 ISCUQ9H1K1 167 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 FZD8Q9H461 694 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 ZFYVE28Q9HCC9 887 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 ADAM22Q9P0K1 906 aa9.45□□□□□ -0.9
MTHFD1-201ENST00000216605 ADGRA2Q96PE1 1338 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 GPR25O00155 361 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 MYO1FO00160 1098 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 CHUKO15111 745 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 FSBPO95073 299 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 CYP2C9P11712 490 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 PDCLQ13371 301 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 ZNF667Q5HYK9 610 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 C15orf39Q6ZRI6 1047 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 YTHDF3Q7Z739 585 aaKnown RBP9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 ARL8AQ96BM9 186 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.44□□□□□ -0.94e-8■■■□□ 16.4
MTHFD1-201ENST00000216605 HOMER3Q9NSC5 361 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 CPSF3Q9UKF6 684 aaKnown RBP9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 NCANO14594 1321 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 ARID2Q68CP9 1835 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 RTN3O95197 1032 aaPredicted RBP9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 ITGB3P05106 788 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 IQCF3P0C7M6 154 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 ARF4P18085 180 aaPredicted RBP9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 LAMB3Q13751 1172 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 CLEC16AQ2KHT3 1053 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 SCARA3Q6AZY7 606 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 MAMDC4Q6UXC1 1216 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 RASAL3Q86YV0 1011 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 OSMRQ99650 979 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 SYT11Q9BT88 431 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 NIF3L1Q9GZT8 377 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 EPN3Q9H201 632 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 SYNCQ9H7C4 482 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 TMEM165Q9HC07 324 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 TNFSF13BQ9Y275 285 aa9.44□□□□□ -0.9
MTHFD1-201ENST00000216605 A0A0G2JMZ2 1700 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 LACTBL1A8MY62 500 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 C6orf222P0C671 652 aaPredicted RBP9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 RRM1P23921 792 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 TNFRSF8P28908 595 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 PEX19P40855 299 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 CDR1P51861 262 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 SFSWAPQ12872 951 aaKnown RBP9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 ORC1Q13415 861 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 FAM47CQ5HY64 1035 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 LLGL2Q6P1M3 1020 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 CCDC50Q8IVM0 306 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 KIAA0319LQ8IZA0 1049 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 SNRNP27Q8WVK2 155 aaKnown RBP9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 RNPC3Q96LT9 517 aaKnown RBP9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 ACAP3Q96P50 834 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 NAP1L3Q99457 506 aaPredicted RBP9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 GCOM2Q9BZD3 368 aaPredicted RBP9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 IFT122Q9HBG6 1241 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 CISHQ9NSE2 258 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 GTF3C4Q9UKN8 822 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 KAT6AQ92794 2004 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 ZSCAN5CA6NGD5 496 aaPredicted RBP9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 NFICP08651 508 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 RGS2P41220 211 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 RANBP1P43487 201 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 RAP1GAPP47736 663 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 ATP1A2P50993 1020 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 GUCY2FP51841 1108 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 TTMPQ5BVD1 217 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 JADE1Q6IE81 842 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 KDM7AQ6ZMT4 941 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 KIF12Q96FN5 646 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 RNF19AQ9NV58 838 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 NENFQ9UMX5 172 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 POLIQ9UNA4 740 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 AGAP1Q9UPQ3 857 aa9.43□□□□□ -0.9
MTHFD1-201ENST00000216605 RRN3P2A6NIE6 340 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms