RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 FBXO4Q9UKT5 387 aa16.22■□□□□ 0.19
UPK3A-201ENST00000216211 MRPS17Q9Y2R5 130 aaKnown RBP16.22■□□□□ 0.19
UPK3A-201ENST00000216211 C2CD2Q9Y426 696 aa16.22■□□□□ 0.19
UPK3A-201ENST00000216211 HEPACAM2A8MVW5 462 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 TULP1O00294 542 aaPredicted RBP16.21■□□□□ 0.19
UPK3A-201ENST00000216211 CYB561D2O14569 222 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 TXLNAP40222 546 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 RPS9P46781 194 aaKnown RBP16.21■□□□□ 0.19
UPK3A-201ENST00000216211 TAF6P49848 677 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 ZNF528Q3MIS6 628 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 DNAJB7Q7Z6W7 309 aaPredicted RBP16.21■□□□□ 0.19
UPK3A-201ENST00000216211 MFSD6LQ8IWD5 586 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 ZSWIM2Q8NEG5 633 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 RSPRY1Q96DX4 576 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 LPIN3Q9BQK8 851 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 PANK2Q9BZ23 570 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 GPR88Q9GZN0 384 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 SEL1LQ9UBV2 794 aa16.21■□□□□ 0.19
UPK3A-201ENST00000216211 MAN2B1O00754 1011 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 ZNF263O14978 683 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 KINO60870 393 aaKnown RBP16.2■□□□□ 0.18
UPK3A-201ENST00000216211 GCNT3O95395 438 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 HSP90AA1P07900 732 aaKnown RBP16.2■□□□□ 0.18
UPK3A-201ENST00000216211 GAP43P17677 238 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 CASP5P51878 434 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 WNT7BP56706 349 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 POSTNQ15063 836 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 L1TD1Q5T7N2 865 aaKnown RBP16.2■□□□□ 0.18
UPK3A-201ENST00000216211 TSSK4Q6SA08 328 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 GAREM2Q75VX8 874 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 METTL23Q86XA0 190 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 ZNF687Q8N1G0 1237 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 PSMG2Q969U7 264 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 SAAL1Q96ER3 474 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 ACCSQ96QU6 501 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 USP28Q96RU2 1077 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 SEPT5Q99719 369 aaPredicted RBP16.2■□□□□ 0.18
UPK3A-201ENST00000216211 HINFPQ9BQA5 517 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 FAM213AQ9BRX8 229 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 FGFBP2Q9BYJ0 223 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 ZCWPW1Q9H0M4 648 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 ATXN3LQ9H3M9 355 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 TRPV5Q9NQA5 729 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 DSEQ9UL01 958 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 ASB3Q9Y575 518 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 PIAS3Q9Y6X2 628 aa16.2■□□□□ 0.18
UPK3A-201ENST00000216211 EP300Q09472 2414 aaPredicted RBP16.2■□□□□ 0.18
UPK3A-201ENST00000216211 F5P12259 2224 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 A0A087X0B3 334 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 IL18RAPO95256 599 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 IDEP14735 1019 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 GABRR2P28476 465 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 STAT6P42226 847 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 ID4P47928 161 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 POU5F1Q01860 360 aaKnown RBP16.19■□□□□ 0.18
UPK3A-201ENST00000216211 MTAPQ13126 283 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 MGAT5BQ3V5L5 792 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 WSCD1Q658N2 575 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 ITIH5Q86UX2 942 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 LRRTM3Q86VH5 581 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 YAF2Q8IY57 180 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 KIAA2013Q8IYS2 634 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 THEM5Q8N1Q8 247 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 FAM200AQ8TCP9 573 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 FAM3CQ92520 227 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 E2F7Q96AV8 911 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 BORCS6Q96GS4 357 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 MKNK1Q9BUB5 465 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 HSFX1Q9UBD0 423 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 EXOC7Q9UPT5 735 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 MTMR6Q9Y217 621 aa16.19■□□□□ 0.18
UPK3A-201ENST00000216211 KPNA7A9QM74 516 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 ARNTLO00327 626 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 ATF6P18850 670 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 TUFMP49411 452 aaKnown RBP16.18■□□□□ 0.18
UPK3A-201ENST00000216211 CYP4F8P98187 520 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 SLC39A14Q15043 492 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 SV2CQ496J9 727 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 GPR158Q5T848 1215 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 CCDC73Q6ZRK6 1079 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 ARID3BQ8IVW6 561 aaPredicted RBP16.18■□□□□ 0.18
UPK3A-201ENST00000216211 DCLK2Q8N568 766 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 SUMF1Q8NBK3 374 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 GIPC2Q8TF65 315 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 ZNF560Q96MR9 790 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 LMAN1LQ9HAT1 526 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 PRMT8Q9NR22 394 aaPredicted RBP16.18■□□□□ 0.18
UPK3A-201ENST00000216211 OLFML3Q9NRN5 406 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 DNAH14Q0VDD8 3507 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 OTOGLQ3ZCN5 2332 aa16.18■□□□□ 0.18
UPK3A-201ENST00000216211 GOLGA8IPA6NC78 632 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 GOLGA8JA6NMD2 632 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 DPYSL4O14531 572 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 FGF19O95750 216 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 CCNE1P24864 410 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 TFAMQ00059 246 aaKnown RBP16.17■□□□□ 0.18
UPK3A-201ENST00000216211 FCHO2Q0JRZ9 810 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 VEPH1Q14D04 833 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 ARHGAP15Q53QZ3 475 aa16.17■□□□□ 0.18
UPK3A-201ENST00000216211 NT5DC4Q86YG4 428 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms