RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 PCDHB4Q9Y5E5 795 aa11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 KRT1P04264 644 aa11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 POTEJP0CG39 1038 aa11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 KRT4P19013 534 aa11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 RASSF2P50749 326 aa11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 BRDTQ58F21 947 aaPredicted RBP11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 MFSD7Q6UXD7 560 aa11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 TMC2Q8TDI7 906 aa11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 FNBP1Q96RU3 617 aa11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 MAK16Q9BXY0 300 aaKnown RBP11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 DENND2DQ9H6A0 471 aaPredicted RBP11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 SMG5Q9UPR3 1016 aaKnown RBP11.1□□□□□ -0.63
CX3CL1-201ENST00000006053 MAGEB2O15479 319 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 PRPF4O43172 522 aaKnown RBP eCLIP11.09□□□□□ -0.631e-6■■■■□ 19.8
CX3CL1-201ENST00000006053 ATP9AO75110 1047 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 FAM163BP0C2L3 166 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 FGFR1P11362 822 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 PIK3CAP42336 1068 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 SNRPFP62306 86 aaKnown RBP11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 SP4Q02446 784 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 GCNT1Q02742 428 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 MAMLD1Q13495 774 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 EFTUD2Q15029 972 aaKnown RBP eCLIP11.09□□□□□ -0.633e-6■■■□□ 19
CX3CL1-201ENST00000006053 CCDC6Q16204 474 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 FYB2Q5VWT5 728 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 MON1BQ7L1V2 547 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 LMNTD2Q8IXW0 634 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 KATNAL2Q8IYT4 538 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 GPD1LQ8N335 351 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 EXD1Q8NHP7 514 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 ZNF75CPQ92670 426 aaPredicted RBP11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 INPP5DQ92835 1189 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 MFSD14AQ96MC6 490 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 ST6GALNAC4Q9H4F1 302 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 SERPINA10Q9UK55 444 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 SCAF8Q9UPN6 1271 aaKnown RBP11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 A0A0G2JND7 137 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 SGK1O00141 431 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 LIASO43766 372 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 ENTPD3O75355 529 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 NEFHP12036 1026 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 ADRA1DP25100 572 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 PTDSS1P48651 473 aaKnown RBP11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 CCNG1P51959 295 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 RPL7AP62424 266 aaKnown RBP11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 MRPS9P82933 396 aaKnown RBP11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 AOC3Q16853 763 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 CEP128Q6ZU80 1094 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 ENOSF1Q7L5Y1 443 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 RELL1Q8IUW5 271 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 ZNF516Q92618 1163 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 TTC25Q96NG3 672 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 C10orf88Q9H8K7 445 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 MRPL47Q9HD33 250 aaKnown RBP11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 TESPA1A2RU30 521 aaPredicted RBP11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 ATP2A1O14983 1001 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 RTN3O95197 1032 aaPredicted RBP11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 ZBTB7AO95365 584 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 HLA-DRAP01903 254 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 LINGO3P0C6S8 592 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 GNA15P30679 374 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 PSMC4P43686 418 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 PSMC5P62195 406 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 LMNB2Q03252 620 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 MAPK6Q16659 721 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 MUM1Q2TAK8 710 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 ANO7Q6IWH7 933 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 APBB1IPQ7Z5R6 666 aaPredicted RBP11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 CEP170P1Q96L14 293 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 TMEM121Q9BTD3 319 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 MRIQ9BWK5 157 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 TMOD2Q9NZR1 351 aa11.09□□□□□ -0.63
CX3CL1-201ENST00000006053 CFAP69A5D8W1 941 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 DPPA5A6NC42 116 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 CYP1A1P04798 512 aaPredicted RBP11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 SSTR1P30872 391 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 ACOT2P49753 483 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 BPIFB4P59827 614 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 DYNLT1P63172 113 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 QSER1Q2KHR3 1735 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 RFWD3Q6PCD5 774 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 CENPUQ71F23 418 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 TMEM174Q8WUU8 243 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 RMI1Q9H9A7 625 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 PSMC3IPQ9P2W1 217 aaPredicted RBP11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 TROVE2P10155 538 aaKnown RBP eCLIP11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 PTPN4P29074 926 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 TPP2P29144 1249 aaPredicted RBP11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 GAD2Q05329 585 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 PTP4A2Q12974 167 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 TSNAXIP1Q2TAA8 658 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 MFSD4BQ5TF39 518 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 FAM160B2Q86V87 743 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 C4orf19Q8IY42 314 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 FEZF2Q8TBJ5 459 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 TAAR1Q96RJ0 339 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 FOXP3Q9BZS1 431 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 SENP1Q9P0U3 644 aa11.08□□□□□ -0.64
CX3CL1-201ENST00000006053 LRRC42Q9Y546 428 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms