RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Pcmtd2Q8BHD8 359 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Krtap5-3Q9D226 196 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Q9D937 123 aaKnown RBP14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gprc5dQ9JIL6 344 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Cep170Q6A065 1588 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 PtprcP06800 1291 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Rrp36Q3UFY0 244 aaKnown RBP14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Atg9aQ68FE2 551 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Utp14bQ6EJB6 756 aaKnown RBP14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Efl1Q8C0D5 1127 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Mrfap1Q9CQL7 125 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 IscuQ9D7P6 168 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Timm50Q9D880 353 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Rbm6S4R1W5 1118 aaKnown RBP14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm8926L7MUE8 181 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 WapP01173 134 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gnrh1P13562 90 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 StilQ60988 1262 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Elac2Q80Y81 831 aaKnown RBP14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 1700001J03RikQ80ZR8 219 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 RbakQ8BQC8 711 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Stard7Q8R1R3 373 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 RnpepQ8VCT3 650 aaKnown RBP14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Pcdha5Q91Y15 934 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Trim13Q9CYB0 407 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Terb2Q9D494 218 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gmeb1Q9JL60 562 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Actl7aQ9QY84 440 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Nphs1Q9QZS7 1256 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Osbpl10S4R1M9 766 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm4869A0A1B0GSG7 984 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 A0A1Y7VP24 259 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Psmc3O88685 442 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Cyp2j11Q3UNV2 504 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Capn11Q6J756 714 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ddx55Q6ZPL9 600 aaKnown RBP14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 LdhdQ7TNG8 484 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Nup107Q8BH74 926 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Epc2Q8C0I4 808 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Cadm1Q8R5M8 456 aaKnown RBP14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Anapc4Q91W96 807 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Pdk2Q9JK42 407 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Dcun1d1Q9QZ73 259 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Slfn2Q9Z0I6 378 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Fam129cD3YZB0 591 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Rbm20Q3UQS8 1199 aaKnown RBP14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 ChfrQ810L3 664 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 TrabdQ99JY4 376 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Pole3Q9JKP7 145 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Rbck1Q9WUB0 508 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Uhrf1bp1B2KF50 1429 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm8237E9Q257 205 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 F830016B08RikG3UWE2 416 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Akr1b7P21300 316 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Vps33bP59016 617 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Tsc22d1P62500 1077 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Cyp2c67Q569X9 491 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Plekha8Q80W71 519 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Atg14Q8CDJ3 492 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Atp13a1Q9EPE9 1200 aaKnown RBP14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Spag6Q9JLI7 507 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Pkp3Q9QY23 797 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm28897A0A087WP44 222 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Klhl18A0A0G2JGN5 579 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ttc16Q8C1F5 767 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Dennd2aQ8C4S8 1000 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Lgi2Q8K4Z0 550 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Taf6lQ8R2K4 616 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Olfr1494Q8VGP8 315 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Vps11Q91W86 941 aaKnown RBP14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ndufaf1Q9CWX2 328 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Cmtr1Q9DBC3 837 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Prl2c3P04768 224 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ccna2P51943 422 aaKnown RBP14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ccndbp1Q3TVC7 356 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Akap14Q3V0I7 536 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 H2afy2Q8CCK0 372 aaKnown RBP14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Trim31Q8R0K2 507 aa14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Nmd3Q99L48 503 aaKnown RBP14.56□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Olfr726E9Q8X3 321 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm44G3UW88 330 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ccnd1P25322 295 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Sar1aP36536 198 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 TfamP40630 243 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Tmprss15P97435 1069 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Olfr725Q05A45 321 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm4952Q5FW57 296 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Klra7Q60654 280 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Stxbp2Q64324 593 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Krt42Q6IFX2 452 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Reep2Q8VCD6 254 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Smok2bQ9QYZ3 484 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Smok2aQ9QYZ6 504 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Entpd5Q9WUZ9 427 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Speer4eK7N6S8 255 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Apoa4P06728 395 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Rag1P15919 1040 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Usp4P35123 962 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Spdye4aQ5IBH6 268 aa14.55□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Yipf1Q91VU1 306 aa14.55□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms