RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Gm4297D3YWB7 211 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Spata31d1dE9Q5W2 1247 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Folh1O35409 752 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Klc1O88447 541 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gdap1O88741 358 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Abhd15Q5F2F2 459 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gucy2fQ5SDA5 1108 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Znf507Q6ZPY5 941 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 TpppQ7TQD2 218 aaKnown RBP11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Atp6v0d2Q80SY3 350 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gm5622Q810Q0 167 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Sgip1Q8VD37 806 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Me2Q99KE1 589 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Slc12a9Q99MR3 914 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tas1r1Q99PG6 842 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rtn3Q9ES97 964 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Noa1Q9JJG9 693 aaKnown RBP11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tuba8Q9JJZ2 449 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Kank3Q9Z1P7 791 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Mia3Q8BI84 1930 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Celf5D3Z4T1 395 aaKnown RBP11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Il27raO70394 623 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Fam167bP17257 162 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Grm2Q14BI2 872 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Nr1d1Q3UV55 615 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Abi3bpQ59IW6 1179 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Cyfip2Q5SQX6 1253 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ccdc25Q78PG9 208 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Znf579Q80VM4 562 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 SfpqQ8VIJ6 699 aaKnown RBP11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 AslQ91YI0 464 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ndufab1Q9CR21 156 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Smyd3Q9CWR2 428 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Mrps9Q9D7N3 390 aaKnown RBP11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Pdk2Q9JK42 407 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 RpgrQ9R0X5 1001 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Fzd9Q9R216 592 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Znf394Q9Z1D9 521 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Sbno2Q7TNB8 1349 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Atad5Q4QY64 1826 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tbc1d25A1A5B6 742 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ifnb1P01575 182 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 MafP54843 370 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Fam92bQ3V2J0 292 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ccdc125Q5U465 500 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 JrkQ60976 557 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ush1gQ80T11 461 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 3830417A13RikQ8BQJ2 303 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ccser1Q8C0C4 895 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Mamdc2Q8CG85 686 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Lsm14bQ8CGC4 385 aaKnown RBP11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Sugp1Q8CH02 643 aaKnown RBP11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 D630039A03RikQ8K0M7 236 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Six6os1Q9CTN5 574 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Castor1Q9CWQ8 331 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Fam173bQ9D1Z3 247 aa11.97□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Znf804aA2AKY4 1200 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Slfn9B1ARD6 910 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Myo1eE9Q634 1107 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 EpoP07321 192 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ncam1P13595 1115 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tbx3P70324 741 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Bbof1Q3V079 533 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Miga1Q4QQM5 600 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Zdhhc24Q6IR37 284 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Q8BGD0 127 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 B3glctQ8BHT6 489 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tdp1Q8BJ37 609 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ticam2Q8BJQ4 232 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 PdgfcQ8CI19 345 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Samd14Q8K070 417 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Dlk2Q8K1E3 382 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 BlmhQ8R016 455 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ssx2ipQ8VC66 615 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Serbp1Q9CY58 407 aaKnown RBP11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tmem53Q9D0Z3 276 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rab11fip1Q9D620 645 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Xab2Q9DCD2 855 aaKnown RBP11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tnfsf13bQ9WU72 309 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tnfrsf18O35714 228 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Pde8aO88502 823 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gap43P06837 227 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Lamp1P11438 406 aaKnown RBP11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tulp2P46686 562 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Pdcd2P46718 343 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Wfs1P56695 890 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ttc39dQ0VF76 604 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rnf180Q3U827 592 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Wdr41Q3UDP0 460 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Dtx3lQ3UIR3 748 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ppp1r7Q3UM45 361 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Odr4Q4PJX1 447 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Vav2Q60992 868 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Daam2Q80U19 1115 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Fgd5Q80UZ0 1219 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Znf467Q8JZL0 594 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Olfr397Q8VEZ6 315 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ctu1Q99J10 420 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tpgs1Q99MS8 303 aa11.96□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Trim8Q99PJ2 551 aa11.96□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms