RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Ugt1a1Q63886 535 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Smarca1Q6PGB8 1046 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pum3Q8BKS9 647 aaKnown RBP7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rftn2Q8CHX7 500 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Slc26a6Q8CIW6 758 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Taf6lQ8R2K4 616 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Snx9Q91VH2 595 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Txndc5Q91W90 417 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Copb1Q9JIF7 953 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Anapc7Q9WVM3 565 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Thsd7bQ6P4U0 1607 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Fam205aA2APU8 1308 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Sf3b1Q99NB9 1304 aaKnown RBP7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm45713A0A1B0GS68 446 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Klhdc7bA0A286YD60 1263 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Grik3B1AS29 919 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm13212B1ASQ7 799 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Clca3bE9PUL3 1044 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Sesn2P58043 480 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Il1rapl1P59823 695 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ppp3caP63328 521 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 GaltQ03249 379 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Zscan2Q07230 614 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Dzip1lQ499E4 774 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Acbd5Q5XG73 508 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Zbtb17Q60821 794 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Mxd4Q60948 209 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 CybbQ61093 570 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Znf532Q6NXK2 1036 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rnf139Q7TMV1 668 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Qsox1Q8BND5 748 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Creb3l3Q91XE9 479 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Usp11Q99K46 921 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tsnaxip1Q99P25 704 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gadd45gQ9Z111 159 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm4302E9PX25 294 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pgrmc1O55022 195 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Hoxc13P50207 328 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cyp2c65Q148B1 490 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ccdc160Q3UYG1 323 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm5169Q5M8P2 212 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm11487Q5RIS0 354 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 DstykQ6XUX1 927 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Znf12Q7TSI0 686 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Trim6Q8BGE7 488 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gramd4Q8CB44 633 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 DarsQ922B2 501 aaKnown RBP7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ppp1r3gQ9CW07 347 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Syap1Q9D5V6 365 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Fthl17aQ9DAX0 182 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Trhr2Q9ERT2 382 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gkap1Q9JMB0 366 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Zc3h4Q6ZPZ3 1304 aaKnown RBP7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 FAM186AQ9D9R9 1790 aa7.31□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm281D3Z1Y0 860 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tcp10bE9PYJ0 438 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tcp10cE9Q046 482 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 1700122O11RikJ3QPW6 241 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 P01644 108 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 P01645 108 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 P01646 108 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 P01647 108 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rtel1Q0VGM9 1203 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Znf512Q69Z99 562 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tas2r115Q7M719 310 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gpr62Q80UC6 358 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Llgl1Q80Y17 1036 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ccdc40Q8BI79 1192 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 SowahaQ8BLS7 548 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tmem209Q8BRG8 561 aaKnown RBP7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Spice1Q8C804 860 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Kat5Q8CHK4 513 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Clec4a3Q8JZX6 237 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Olfr1499Q8VG65 314 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Akr1c14Q91WT7 323 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Slamf8Q9D3G2 278 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Fut2Q9JL27 347 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Sbno2Q7TNB8 1349 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm6657A0A1B0GRJ3 277 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ca3P16015 260 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 CstaP56567 97 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Opa1P58281 960 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Grin2dQ03391 1323 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Specc1lQ2KN98 1118 aaKnown RBP7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Olfml2bQ3V1G4 746 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 FAM120AQ6A0A9 1112 aaKnown RBP7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Stk40Q7TNL3 435 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Kremen2Q8K1S7 461 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ugt2b1Q8R084 529 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Nxnl1Q8VC33 217 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Olfr348Q8VGK3 313 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Asb7Q91ZU0 318 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tom1l1Q923U0 474 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pramel1Q99MW3 458 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pcyox1Q9CQF9 505 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Prpf40aQ9R1C7 953 aaKnown RBP7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cnbd1B1AWM0 430 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Bcl7cO08664 217 aa7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Men1O88559 611 aaKnown RBP7.3□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Shmt1P50431 478 aa7.3□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms