RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Pitpnm1O35954 1243 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 GfapP03995 430 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Mybl2P48972 704 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Crnkl1P63154 690 aaKnown RBP8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Mark3Q03141 753 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 KhsrpQ3U0V1 748 aaKnown RBP8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Pid1Q3UBG2 217 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Klhdc9Q3USL1 350 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Odr4Q4PJX1 447 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Tdrd5Q5VCS6 1040 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Fam196bQ6GQV1 535 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Orai3Q6P8G8 290 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Cpsf7Q8BTV2 471 aaKnown RBP8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ppme1Q8BVQ5 386 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Trmt13Q8BYH3 481 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Serpinb13Q8CDC0 389 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Pcdha10Q91Y20 946 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Zbed3Q9D0L1 228 aa8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gtf2iQ9ESZ8 998 aaKnown RBP8.7□□□□□ -1.02
Cdc40-201ENSMUST00000044166 DohhA0A1Y7VJ29 135 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Arhgap42B2RQE8 841 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gm5926E9PWJ8 236 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Rad51bO35719 350 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 PdgfaP20033 211 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Vcam1P29533 739 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Cdc25cP48967 447 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 HpdP49429 393 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Nt5c2Q3V1L4 560 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gm14685Q52KH6 695 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 FancbQ5XJY6 703 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Map3k12Q60700 888 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Atp4aQ64436 1033 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 IgflQ6B9Z0 140 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Zswim6Q80TB7 1207 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ms4a5Q810P8 197 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 P2ry10Q8BFU7 328 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Mterf2Q8BKY8 385 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 HnrnprQ8VHM5 632 aaKnown RBP8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Rev1Q920Q2 1249 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Cdc26Q99JP4 85 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Taf11Q99JX1 211 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Txnrd3Q99MD6 652 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Cd2bp2Q9CWK3 342 aaKnown RBP8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Dusp21Q9D9D8 189 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Slc15a2Q9ES07 729 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Lypla2Q9WTL7 231 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Fam205aA2APU8 1308 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Rtl9Q32KG4 1339 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 C4bP01029 1738 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Btbd35f16A0A087WSN2 498 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Znf804aA2AKY4 1200 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ildr2B5TVM2 661 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 DgkkE9Q7N4 1118 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gm1661E9Q963 441 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Tekt5G5E8A8 557 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Serpinb8O08800 374 aaKnown RBP8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Cyth3O08967 399 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ifnb1P01575 182 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Tgfb3P17125 410 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Syt2P46097 422 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 InaP46660 501 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Rfx2P48379 717 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gbp10Q000W5 611 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Kcnc2Q14B80 642 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 YdjcQ14BV6 310 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Nutm2Q3V0C3 733 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gas7Q60780 421 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Zcchc2Q69ZB8 1166 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Trim14Q8BVW3 440 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Slc12a8Q8VI23 705 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Nt5c1bQ91YE9 573 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Rex1bdQ9CYZ6 169 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Atp5dQ9D3D9 168 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ptgdr2Q9Z2J6 382 aa8.69□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Prdm15E9Q8T2 1174 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Got1P05201 413 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 LdhbP16125 334 aaKnown RBP8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Marcksl1P28667 200 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gpsm3Q3U1Z5 159 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Dab2ipQ3UHC7 1189 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Glg1Q61543 1175 aaKnown RBP8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Cdc14aQ6GQT0 603 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Atp2b4Q6Q477 1205 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Slc7a6osQ7TPE5 306 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Tmtc4Q8BG19 741 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Tor4aQ8BH02 426 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Sun2Q8BJS4 731 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 AsphQ8BSY0 741 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 CenpuQ8C4M7 410 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ago4Q8CJF8 861 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 YarsQ91WQ3 528 aaKnown RBP8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Vmp1Q99KU0 406 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Dppa5aQ9CQS7 118 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Dnaaf1Q9D2H9 634 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Sdr42e1Q9D665 394 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Q9DAQ4 598 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Rnf6Q9DBU5 667 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 St6galnac1Q9QZ39 526 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Clcn2Q9R0A1 908 aa8.68□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Spata31d1aE9QA35 1336 aa8.68□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms