RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Tom1O88746 492 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Agap2Q3UHD9 1186 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gm13103Q4VAD2 491 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ppp1r13lQ5I1X5 824 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Glra2Q7TNC8 452 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Pkn2Q8BWW9 983 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Svs3bQ8BZH8 265 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 MslnlQ8C160 685 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Snapc2Q91XA5 359 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Def8Q99J78 448 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 GatbQ99JT1 557 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Tgm5Q9D7I9 724 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Rsph3bQ9DA80 389 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ddx24Q9ESV0 857 aaKnown RBP18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Mast2Q60592 1734 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Lonrf1D3YY23 762 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Aknad1E9Q8N6 675 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 PhbP67778 272 aaKnown RBP18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Glt6d1Q2NKH9 311 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ms4a5Q810P8 197 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gps1Q99LD4 471 aaKnown RBP18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Atp6v1g1Q9CR51 118 aa18.65■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Zfc3h1B2RT41 1992 aaKnown RBP18.64■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Zscan4-ps3A0A1B0GRH6 506 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Zscan4-ps2A0A1C7CYU6 506 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Serpini1O35684 410 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 NsfP46460 744 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 AdssP46664 456 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Rhox5P52651 210 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Nub1P54729 614 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Fam129aQ3UW53 926 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Fam92bQ3V2J0 292 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Itih3Q61704 889 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Arid3aQ62431 601 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Kiaa0391Q8JZY4 584 aaKnown RBP18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Otud7aQ8R554 926 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 PrccQ9EQC8 491 aaKnown RBP18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Angptl2Q9R045 493 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Cetn2Q9R1K9 172 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Gm3415J3QMS8 315 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Adcy7P51829 1099 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Rmdn3Q3UJU9 470 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Vwa3aQ3UVV9 1148 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Znf76Q8BMU0 568 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 HmcesQ8R1M0 353 aaKnown RBP18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 TgdsQ8VDR7 355 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Sytl1Q99N80 567 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Wars2Q9CYK1 360 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Dnajc18Q9CZJ9 357 aa18.64■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Arhgef37A1IGU4 676 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Mroh5E9PUJ8 762 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Gm8444F6XS56 118 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Adam7O35227 789 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Alkbh1P0CB42 389 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Gad2P48320 585 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Mylk3Q3UIZ8 795 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Fam185aQ7TPD2 378 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Atxn2lQ7TQH0 1049 aaKnown RBP18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Klhl11Q8CE33 709 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Q9DAQ4 598 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Zbtb12Q9Z150 459 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Cyp4f40G3UW81 524 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Barx2O08686 283 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Myl1P05977 188 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Icam1P13597 537 aaKnown RBP18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Gja8P28236 440 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Rab20P35295 233 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Pex2P55098 305 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Slc17a7Q3TXX4 560 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 OtulinQ3UCV8 352 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Shroom1Q5SX79 823 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 HarsQ61035 509 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Tm4sf1Q64302 202 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Pcdhb5Q91XZ5 792 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Tceal1Q921P9 165 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Dph6Q9CQ28 267 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Batf3Q9D275 118 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Drc3Q9D5E4 523 aa18.63■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Slc16a2O70324 545 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Ppargc1aO70343 797 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Irf8P23611 424 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Znf112Q0VAW7 879 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Eif2dQ61211 570 aaKnown RBP18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 AlcamQ61490 583 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 N4bp1Q6A037 893 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Ccdc117Q6PB51 277 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Usp8Q80U87 1080 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Ccser1Q8C0C4 895 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Hes6Q9JHE6 224 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Vmn2r104E9Q2J5 860 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 MyocO70624 490 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Vav1P27870 845 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Usp46P62069 366 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Epas1P97481 874 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Prmt9Q3U3W5 846 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Q3U4G0 281 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Il17aQ62386 158 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Nuak1Q641K5 658 aa18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Rbm12b1Q80YR9 836 aaKnown RBP18.62■□□□□ 0.57
Sqstm1-201ENSMUST00000015981 Slc17a8Q8BFU8 601 aa18.62■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms