RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Atp6v1c1Q9Z1G3 382 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 OvosQ3UU35 1456 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Lonrf1D3YY23 762 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Foxn2E9Q7L6 429 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Rps6ka3P18654 740 aaKnown RBP12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Arpp19P56212 112 aaKnown RBP12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Tmem35bQ3U0Y2 150 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Lcn3Q62471 182 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Rapgefl1Q68EF8 662 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Eps8l1Q8R5F8 716 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Ppp1r16bQ8VHQ3 568 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Hars2Q99KK9 505 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Adck1Q9D0L4 525 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 DtnaQ9D2N4 746 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Pou5f2Q9DAC9 329 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Lamc3Q9R0B6 1581 aa12.73□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Speer4eK7N6S8 255 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 MntO08789 591 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 RargP18911 458 aaKnown RBP12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Abi2P62484 446 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Arhgef16Q3U5C8 713 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Klra5Q60652 266 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Catsper4Q8BVN3 442 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Gramd1aQ8VEF1 722 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Idh3bQ91VA7 384 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Plagl2Q925T4 496 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Prpf4Q9DAW6 521 aaKnown RBP12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 RalaP63321 206 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Ddr1Q03146 911 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Mcm9Q2KHI9 1134 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Nlrp9cQ66X01 1004 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Otop3Q80UF9 577 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Ubxn10Q8BG34 277 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Rassf9Q8K342 435 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 GatbQ99JT1 557 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Gpatch1Q9DBM1 930 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Map3k15A2AQW0 1331 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Lrrc7Q80TE7 1490 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Srsf11E9Q6E5 511 aaKnown RBP12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Sec22bO08547 215 aaKnown RBP12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Trim63Q38HM4 350 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 E2f7Q6S7F2 904 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Pnma1Q8C1C8 353 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 ItchQ8C863 864 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Tmem119Q8R138 280 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 RorbQ8R1B8 470 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Tbc1d19Q8VDV7 526 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Igsf1Q7TQA1 1317 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Camsap1A2AHC3 1581 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Gm17093F6XGJ4 214 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Gm8298J3QPI0 401 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 C1dO35473 141 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Soat2O88908 525 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Rrm2P11157 390 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Ccdc185Q3V118 621 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Kctd19Q562E2 927 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 E2f4Q8R0K9 410 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Stk33Q924X7 491 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Emc3Q99KI3 261 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Ddah1Q9CWS0 285 aa12.72□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Krt83E9Q1Y9 479 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Alppl2P24823 529 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Ccnd2P30280 289 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Sesn1P58006 492 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Snap25P60879 206 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Slc2a13Q3UHK1 637 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Akap4Q60662 849 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Fnip1Q68FD7 1165 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Exoc3l4Q6DIA2 721 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Gemin4Q6P6L6 1058 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Sik2Q8CFH6 931 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Rprd1bQ9CSU0 326 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Rhobtb3Q9CTN4 611 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Khdrbs3Q9R226 346 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Ap4s1Q9WVL1 144 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Tjp2Q9Z0U1 1167 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Gm20911A0A087WSS0 222 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Btbd18A0A0A6YY25 723 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Mocs3A2BDX3 460 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 MndalD0QMC3 538 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Kif1cO35071 1100 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Fgd3O88842 733 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Stat3P42227 770 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Traf3Q60803 567 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Gstt2Q61133 244 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Papd5Q68ED3 633 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Sema3dQ8BH34 777 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Alg9Q8VDI9 611 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Chid1Q922Q9 393 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Neu2Q9JMH3 379 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Dnajc7Q9QYI3 494 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Igf1rQ60751 1373 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Ptch1Q61115 1434 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Srpk1O70551 648 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Il1rl1P14719 567 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Man1a1P45700 655 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Nedd4P46935 887 aaKnown RBP12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Clec4fP70194 548 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Mapk10Q61831 464 aa12.71□□□□□ -0.37
Pcdhac1-201ENSMUST00000007584 Trnau1apQ80VC6 287 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms