RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 ThegQ9JMB1 375 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Pkp3Q9QY23 797 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Fam208aQ69ZR9 1610 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Hk2O08528 917 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Fkbp1aP26883 108 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rbp1Q00915 135 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 VcpQ01853 806 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Wdr91Q7TMQ7 748 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mxd3Q80US8 206 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 TdrkhQ80VL1 560 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Chmp2bQ8BJF9 213 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Fam102bQ8BQS4 339 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 OplahQ8K010 1288 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 NclnQ8VCM8 563 aaKnown RBP9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 TraipQ8VIG6 470 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Nmrk1Q91W63 195 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Oas1cQ924S2 362 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cib4Q9D9N5 185 aa9.55□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Kctd14A0A0U1RNG7 287 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ism1A2ATD1 454 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 AK157302I3ITR1 129 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ppargc1aO70343 797 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sco1Q5SUC9 284 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tbc1d12Q6A039 696 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Bsdc1Q80Y55 427 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Abraxas1Q8BPZ8 407 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Zmym6Q8BS54 1249 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 HpdlQ8K248 371 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cpa5Q8R4H4 436 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ciapin1Q8WTY4 309 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Atp6v1b1Q91YH6 513 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 CoprsQ9CQ13 173 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cep72Q9D3R3 646 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ccdc130Q9D516 385 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Isca1Q9D924 129 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 PfkpQ9WUA3 784 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Kif1bQ60575 1816 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm21497A0A087WRK3 222 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm379J3QQ19 296 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cct8P42932 548 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Garnl3Q3V0G7 1038 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mettl25Q6NXH8 597 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Nudt16Q6P3D0 195 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Magee1Q6PCZ4 918 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tmem270Q6UJB9 264 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tas2r131Q7M708 310 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Wnk4Q80UE6 1222 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Klhl31Q8BWA5 634 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Agap1Q8BXK8 857 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Snx16Q8C080 344 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sik2Q8CFH6 931 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 DnerQ8JZM4 737 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ccdc137Q8R0K4 290 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Lman1lQ8VCD3 505 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Reep2Q8VCD6 254 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mtmr4Q91XS1 1190 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Nsmce3Q9CPR8 279 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tomm70Q9CZW5 611 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Wdsub1Q9D0I6 474 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mad2l2Q9D752 211 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sertad1Q9JL10 236 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Acsl4Q9QUJ7 711 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Abca5Q8K448 1642 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Olfr1354E9Q5G9 310 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Lrrc4bP0C192 709 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 CratP47934 626 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Lag3Q61790 521 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Nlrp9cQ66X01 1004 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tlr11Q6R5P0 926 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tmc4Q7TQ65 694 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 TbataQ7TSD4 393 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Polr2eQ80UW8 210 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Iars2Q8BIJ6 1012 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Acat1Q8QZT1 424 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ndufaf1Q9CWX2 328 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Fam162aQ9D6U8 155 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rpap3Q9D706 660 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 FignQ9ERZ6 759 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Uchl3Q9JKB1 230 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Klra17Q9JMA4 273 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Bmp15Q9Z0L4 392 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 PtpruB1AUH1 1446 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 AlkP97793 1621 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm2832F7AEC7 200 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Serpinh1P19324 417 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Akr1b7P21300 316 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tpp2Q64514 1262 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Pnma2Q8BHK0 365 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tbc1d10cQ8C9V1 444 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Nemp2Q8CB65 421 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Yipf1Q91VU1 306 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Katnal2Q9D3R6 539 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Habp4Q9JKS5 411 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Abt1Q9QYL7 269 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rasgrp1Q9Z1S3 795 aa9.54□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 CtcflA2APF3 636 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mup6A2AV72 179 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 1700024B05RikE9Q6D7 167 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Zc3h7bF8VPP8 982 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Zbtb11G5E8B9 1050 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms