RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W TY2A-LR1P0C2J4 438 aa5.16□□□□□ -1.58
SKN1YGR143W COX10P21592 462 aa5.16□□□□□ -1.58
SKN1YGR143W TY2A-CP25383 438 aa5.16□□□□□ -1.58
SKN1YGR143W SGE1P33335 543 aa5.16□□□□□ -1.58
SKN1YGR143W PRS4P38063 326 aaPredicted RBP5.16□□□□□ -1.58
SKN1YGR143W YBR184WP38299 523 aa5.16□□□□□ -1.58
SKN1YGR143W ISC1P40015 477 aaKnown RBP5.16□□□□□ -1.58
SKN1YGR143W TIF34P40217 347 aaKnown RBP5.16□□□□□ -1.58
SKN1YGR143W VEL1P53058 206 aa5.16□□□□□ -1.58
SKN1YGR143W NCE103P53615 221 aa5.16□□□□□ -1.58
SKN1YGR143W ELP4Q02884 456 aaKnown RBP5.16□□□□□ -1.58
SKN1YGR143W TY2A-DR2Q03483 438 aa5.16□□□□□ -1.58
SKN1YGR143W YOR376WQ08900 122 aa5.16□□□□□ -1.58
SKN1YGR143W TY2A-BQ12260 438 aa5.16□□□□□ -1.58
SKN1YGR143W TY2A-OR2Q12293 438 aa5.16□□□□□ -1.58
SKN1YGR143W TY2A-DR1Q12392 438 aa5.16□□□□□ -1.58
SKN1YGR143W TY2A-OR1Q12439 438 aa5.16□□□□□ -1.58
SKN1YGR143W RAX2Q12465 1220 aa5.16□□□□□ -1.58
SKN1YGR143W YMR030W-AQ3E760 96 aa5.16□□□□□ -1.58
SKN1YGR143W TY2A-DR3Q99303 438 aa5.16□□□□□ -1.58
SKN1YGR143W IRA2P19158 3079 aa5.16□□□□□ -1.58
SKN1YGR143W SIR2P06700 562 aa5.15□□□□□ -1.58
SKN1YGR143W CDC26P14724 124 aa5.15□□□□□ -1.58
SKN1YGR143W INO2P26798 304 aa5.15□□□□□ -1.58
SKN1YGR143W COX13P32799 129 aa5.15□□□□□ -1.58
SKN1YGR143W YGP1P38616 354 aaKnown RBP5.15□□□□□ -1.58
SKN1YGR143W YIL059CP40520 121 aa5.15□□□□□ -1.58
SKN1YGR143W YFL012WP43580 148 aa5.15□□□□□ -1.58
SKN1YGR143W CDH1P53197 566 aa5.15□□□□□ -1.58
SKN1YGR143W MSO1P53604 210 aaKnown RBP5.15□□□□□ -1.58
SKN1YGR143W EST3Q03096 181 aa5.15□□□□□ -1.58
SKN1YGR143W ATG41Q12048 136 aa5.15□□□□□ -1.58
SKN1YGR143W CDC21P06785 304 aa5.15□□□□□ -1.59
SKN1YGR143W UBC5P15732 148 aa5.15□□□□□ -1.59
SKN1YGR143W GAS1P22146 559 aaKnown RBP5.15□□□□□ -1.59
SKN1YGR143W CDC5P32562 705 aa5.15□□□□□ -1.59
SKN1YGR143W MTR2P34232 184 aaKnown RBP5.15□□□□□ -1.59
SKN1YGR143W AIR1P40507 360 aaKnown RBP5.15□□□□□ -1.59
SKN1YGR143W YGR039WP53225 103 aa5.15□□□□□ -1.59
SKN1YGR143W RNH201P53942 307 aa5.15□□□□□ -1.59
SKN1YGR143W HLR1Q04429 423 aa5.15□□□□□ -1.59
SKN1YGR143W FCF1Q05498 189 aaPredicted RBP5.15□□□□□ -1.59
SKN1YGR143W HNT3Q08702 217 aa5.15□□□□□ -1.59
SKN1YGR143W NDD1Q08887 554 aa5.15□□□□□ -1.59
SKN1YGR143W HSP33Q08914 237 aaKnown RBP5.15□□□□□ -1.59
SKN1YGR143W ARF2P19146 181 aaKnown RBP5.14□□□□□ -1.59
SKN1YGR143W MRPL20P22354 195 aaPredicted RBP5.14□□□□□ -1.59
SKN1YGR143W AIM26P32858 118 aa5.14□□□□□ -1.59
SKN1YGR143W YKR041WP36134 250 aa5.14□□□□□ -1.59
SKN1YGR143W YBR063CP38083 404 aa5.14□□□□□ -1.59
SKN1YGR143W YIR007WP40566 764 aa5.14□□□□□ -1.59
SKN1YGR143W PRY1P47032 299 aa5.14□□□□□ -1.59
SKN1YGR143W IZH1Q03419 316 aa5.14□□□□□ -1.59
SKN1YGR143W HRT1Q08273 121 aa5.14□□□□□ -1.59
SKN1YGR143W PRS5Q12265 496 aaKnown RBP5.14□□□□□ -1.59
SKN1YGR143W RPS16AP0CX51 143 aaKnown RBP5.14□□□□□ -1.59
SKN1YGR143W RPS16BP0CX52 143 aaKnown RBP5.14□□□□□ -1.59
SKN1YGR143W MAK32P23060 363 aa5.14□□□□□ -1.59
SKN1YGR143W SKN1P33336 771 aa5.14□□□□□ -1.59
SKN1YGR143W YHR138CP38841 114 aaPredicted RBP5.14□□□□□ -1.59
SKN1YGR143W SPO73P40031 143 aa5.14□□□□□ -1.59
SKN1YGR143W XBP1P40489 647 aa5.14□□□□□ -1.59
SKN1YGR143W MSL1P40567 111 aaPredicted RBP5.14□□□□□ -1.59
SKN1YGR143W PAU5P43575 122 aa5.14□□□□□ -1.59
SKN1YGR143W YJR096WP47137 282 aa5.14□□□□□ -1.59
SKN1YGR143W KEI1Q06346 221 aa5.14□□□□□ -1.59
SKN1YGR143W YDR215CQ12240 137 aa5.14□□□□□ -1.59
SKN1YGR143W RPL7AP05737 244 aaKnown RBP5.13□□□□□ -1.59
SKN1YGR143W ALK2P32789 676 aaPredicted RBP5.13□□□□□ -1.59
SKN1YGR143W DUT1P33317 147 aa5.13□□□□□ -1.59
SKN1YGR143W ASK1P35734 292 aa5.13□□□□□ -1.59
SKN1YGR143W SHB17P36136 271 aaKnown RBP5.13□□□□□ -1.59
SKN1YGR143W RRT5P43607 289 aa5.13□□□□□ -1.59
SKN1YGR143W YGL230CP53074 147 aa5.13□□□□□ -1.59
SKN1YGR143W ARR3Q06598 404 aa5.13□□□□□ -1.59
SKN1YGR143W EMC3P36039 253 aa5.13□□□□□ -1.59
SKN1YGR143W TIR4Q12218 487 aaPredicted RBP5.13□□□□□ -1.59
SKN1YGR143W COX19Q3E731 98 aa5.13□□□□□ -1.59
SKN1YGR143W FPR1P20081 114 aaKnown RBP5.12□□□□□ -1.59
SKN1YGR143W TEM1P38987 245 aa5.12□□□□□ -1.59
SKN1YGR143W PAM16P42949 149 aa5.12□□□□□ -1.59
SKN1YGR143W LCB3P47013 409 aa5.12□□□□□ -1.59
SKN1YGR143W IBD2P53892 351 aa5.12□□□□□ -1.59
SKN1YGR143W YMR087WQ04299 284 aa5.12□□□□□ -1.59
SKN1YGR143W TAZ1Q06510 381 aa5.12□□□□□ -1.59
SKN1YGR143W GEP3Q08622 556 aa5.12□□□□□ -1.59
SKN1YGR143W ICT1Q12385 394 aa5.12□□□□□ -1.59
SKN1YGR143W PFS2P42841 465 aaKnown RBP5.12□□□□□ -1.59
SKN1YGR143W YIP5P53108 310 aa5.12□□□□□ -1.59
SKN1YGR143W YMR166CQ03829 368 aa5.12□□□□□ -1.59
SKN1YGR143W NMA1Q06178 401 aaKnown RBP5.12□□□□□ -1.59
SKN1YGR143W MSB2P32334 1306 aa5.11□□□□□ -1.59
SKN1YGR143W SLY41P22215 453 aa5.11□□□□□ -1.59
SKN1YGR143W PMI40P29952 429 aaKnown RBP5.11□□□□□ -1.59
SKN1YGR143W CMC1P36064 111 aa5.11□□□□□ -1.59
SKN1YGR143W YND1P40009 630 aa5.11□□□□□ -1.59
SKN1YGR143W CWP2P43497 92 aa5.11□□□□□ -1.59
SKN1YGR143W TOS2P50078 622 aa5.11□□□□□ -1.59
SKN1YGR143W LSM3P57743 89 aaKnown RBP5.11□□□□□ -1.59
SKN1YGR143W BET5Q03630 159 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms