RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	YIP5	P53108	310 aa		2.83	□□□□□ -1.96
CMD1	YBR109C	EOS1	P53938	366 aa		2.83	□□□□□ -1.96
CMD1	YBR109C	YDC1	Q02896	317 aa		2.83	□□□□□ -1.96
CMD1	YBR109C	YMR090W	Q04304	227 aa	Known RBP	2.83	□□□□□ -1.96
CMD1	YBR109C	PBA1	Q05778	276 aa		2.83	□□□□□ -1.96
CMD1	YBR109C	NMA1	Q06178	401 aa	Known RBP	2.83	□□□□□ -1.96
CMD1	YBR109C	RRT7	Q07829	113 aa		2.83	□□□□□ -1.96
CMD1	YBR109C	MIM1	Q08176	113 aa		2.83	□□□□□ -1.96
CMD1	YBR109C	FCY22	Q12119	530 aa		2.83	□□□□□ -1.96
CMD1	YBR109C	USB1	Q12208	290 aa	Known RBP	2.83	□□□□□ -1.96
CMD1	YBR109C	COX19	Q3E731	98 aa		2.83	□□□□□ -1.96
CMD1	YBR109C	TRP1	P00912	224 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	OPI3	P05375	206 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	CDC36	P06100	191 aa	Predicted RBP	2.82	□□□□□ -1.96
CMD1	YBR109C	MIR1	P23641	311 aa	Known RBP	2.82	□□□□□ -1.96
CMD1	YBR109C	ATG15	P25641	520 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	POP5	P28005	173 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	DAD2	P36162	133 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	MRPS9	P38120	278 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	AVT5	P38176	459 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	SLM6	P38343	150 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	VMA21	P41806	77 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	NSE4	P43124	402 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	YHC3	P47040	408 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	SLX9	P53251	210 aa	Predicted RBP	2.82	□□□□□ -1.96
CMD1	YBR109C	APS2	Q00381	147 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	PET191	Q02772	108 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	YPL039W	Q03080	316 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	YDR286C	Q05530	114 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	YPR147C	Q06522	304 aa	Known RBP	2.82	□□□□□ -1.96
CMD1	YBR109C	HEM25	Q07534	307 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	YFH1	Q07540	174 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	PAM18	Q07914	168 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	PML1	Q07930	204 aa	Predicted RBP	2.82	□□□□□ -1.96
CMD1	YBR109C	HRT1	Q08273	121 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	NIP7	Q08962	181 aa	Known RBP	2.82	□□□□□ -1.96
CMD1	YBR109C	DCN1	Q12395	269 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	YOR343C	Q12484	108 aa		2.82	□□□□□ -1.96
CMD1	YBR109C	TAO3	P40468	2376 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	YDR157W	A0A023PZE8	133 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.81	□□□□□ -1.96	not detected
CMD1	YBR109C	HHF1	P02309	103 aa	Known RBP	2.81	□□□□□ -1.96
CMD1	YBR109C	CYC3	P06182	269 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	RPL12A	P0CX53	165 aa	Known RBP	2.81	□□□□□ -1.96
CMD1	YBR109C	RPL12B	P0CX54	165 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	ARF1	P11076	181 aa	Known RBP	2.81	□□□□□ -1.96
CMD1	YBR109C	PPA2	P28239	310 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	YBL059W	P34224	193 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	SRX1	P36077	127 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	SDH4	P37298	181 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	TIF34	P40217	347 aa	Known RBP	2.81	□□□□□ -1.96
CMD1	YBR109C	SPG5	P42933	373 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	MOB2	P43563	287 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	BRR6	P53062	197 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	ERV14	P53173	138 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	PAU4	P53427	120 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	PDR16	P53860	351 aa	Known RBP	2.81	□□□□□ -1.96
CMD1	YBR109C	SWS2	P53937	143 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	RNH201	P53942	307 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	VPS28	Q02767	242 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	SNO1	Q03144	224 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	THI74	Q04083	370 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	GMC1	Q04399	608 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	AVO2	Q04749	426 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	PAL1	Q05518	499 aa	Known RBP	2.81	□□□□□ -1.96
CMD1	YBR109C	CTS2	Q06350	511 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	FYV7	Q12247	151 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	YLR118C	Q12354	227 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	DGK1	Q12382	290 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	YOR032W-A	Q8TGS1	66 aa		2.81	□□□□□ -1.96
CMD1	YBR109C	YAL064W-B	O13512	126 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU19	P0CE85	124 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU21	P0CE86	164 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU22	P0CE87	164 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU1	P0CE88	120 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU14	P0CE89	120 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU6	P0CE90	120 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU18	P0CE91	120 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU8	P0CE92	120 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU11	P0CE93	120 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	RPS8A	P0CX39	200 aa	Known RBP	2.8	□□□□□ -1.96
CMD1	YBR109C	RPS8B	P0CX40	200 aa	Known RBP	2.8	□□□□□ -1.96
CMD1	YBR109C	RPL30	P14120	105 aa	Known RBP	2.8	□□□□□ -1.96
CMD1	YBR109C	MRPL44	P19956	98 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	QCR9	P22289	66 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	POF1	P25576	258 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU3	P25610	124 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	RPS27A	P35997	82 aa	Known RBP	2.8	□□□□□ -1.96
CMD1	YBR109C	RPS27B	P38711	82 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PAU13	P38725	120 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PFS1	P38872	237 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	FLX1	P40464	311 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	NAS2	P40555	220 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	PHS1	P40857	217 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	REE1	P40893	198 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	YPI1	P43587	155 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	DAN1	P47178	298 aa		2.8	□□□□□ -1.96
CMD1	YBR109C	RIB4	P50861	169 aa	Predicted RBP	2.8	□□□□□ -1.96
CMD1	YBR109C	NSA1	P53136	463 aa	Predicted RBP	2.8	□□□□□ -1.96
CMD1	YBR109C	BUD25	P85052	153 aa		2.8	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms