RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	PASD1	Q8IV76	773 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	ZNF606	Q8WXB4	792 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	LINC01599	Q8WXQ3	324 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	TWNK	Q96RR1	684 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	RPS6KC1	Q96S38	1066 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	PDCL3	Q9H2J4	239 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	HIPK3	Q9H422	1215 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	RSAD1	Q9HA92	442 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	LUC7L	Q9NQ29	371 aa	Known RBP	11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	RGS18	Q9NS28	235 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	GIT1	Q9Y2X7	761 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	KIAA0100	Q14667	2235 aa	Known RBP	11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	KIF2A	O00139	706 aa	Predicted RBP	11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	P4HA1	P13674	534 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	BRD2	P25440	801 aa	Known RBP	11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	CASQ1	P31415	396 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	RAB27A	P51159	221 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	ZNF132	P52740	706 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	C10orf76	Q5T2E6	689 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	SLC24A5	Q71RS6	500 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	WHAMM	Q8TF30	809 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	CPA5	Q8WXQ8	436 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	TFAP2B	Q92481	460 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	SECISBP2L	Q93073	1101 aa	Known RBP	11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	CYFIP2	Q96F07	1278 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	ZSWIM1	Q9BR11	485 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	PAAF1	Q9BRP4	392 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	TSGA10	Q9BZW7	698 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	THAP2	Q9H0W7	228 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	CAPN6	Q9Y6Q1	641 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	KPNA7	A9QM74	516 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091		C9IYK1	514 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	PITPNM1	O00562	1244 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	ENC1	O14682	589 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	XPOT	O43592	962 aa	Known RBP	11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	CYP3A5	P20815	502 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	CLCNKB	P51801	687 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	TCTN1	Q2MV58	587 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	C2CD6	Q53TS8	623 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	DPH6	Q7L8W6	267 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	DEFB128	Q7Z7B8	93 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	LRRC52	Q8N7C0	313 aa		11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	MRPL45	Q9BRJ2	306 aa	Known RBP	11.17	□□□□□ -0.62
NECAP1-223	ENST00000640091	CASTOR2	A6NHX0	329 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	ENPP3	O14638	875 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	HCRT	O43612	131 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	CILP	O75339	1184 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	STAU1	O95793	577 aa	Known RBP	11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	FGFR1	P11362	822 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	CD19	P15391	556 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	NOP2	P46087	812 aa	Known RBP	11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	NDST1	P52848	882 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	RAD23B	P54727	409 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	LILRA4	P59901	499 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	SOWAHA	Q2M3V2	549 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	PLEKHG4	Q58EX7	1191 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	ZNF598	Q86UK7	904 aa	Known RBP	11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	PGBD4	Q96DM1	585 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	TOX2	Q96NM4	488 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	TSPAN18	Q96SJ8	248 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	ELOVL4	Q9GZR5	314 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	WNT8A	Q9H1J5	351 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	ISCU	Q9H1K1	167 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	SCN1A	P35498	2009 aa		11.16	□□□□□ -0.62
NECAP1-223	ENST00000640091	RTN2	O75298	545 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	TUBB4A	P04350	444 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	GZMA	P12544	262 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	UNG	P13051	313 aa	Predicted RBP	11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	TAF6	P49848	677 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	LRRC26	Q2I0M4	334 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	NAA35	Q5VZE5	725 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	PHLDB2	Q86SQ0	1253 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	TXLNB	Q8N3L3	684 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	SLC4A11	Q8NBS3	891 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	ARHGEF26	Q96DR7	871 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	TMEM176A	Q96HP8	235 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	HEXIM2	Q96MH2	286 aa	Known RBP	11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	CYP3A43	Q9HB55	503 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	OSGEP	Q9NPF4	335 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	SLC38A7	Q9NVC3	462 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	NME7	Q9Y5B8	376 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	ANKRD62	A6NC57	917 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	ATMIN	O43313	823 aa	Predicted RBP	11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	URI1	O94763	535 aa	Predicted RBP	11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	PDGFRB	P09619	1106 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	SKI	P12755	728 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	LRPAP1	P30533	357 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	CDR1	P51861	262 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	YWHAE	P62258	255 aa	Known RBP	11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	FAM189B	P81408	668 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	CLEC16A	Q2KHT3	1053 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	PAN2	Q504Q3	1202 aa	Known RBP	11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	ACAD10	Q6JQN1	1059 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	ZNF677	Q86XU0	584 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	C12orf29	Q8N999	325 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	C3orf58	Q8NDZ4	430 aa		11.15	□□□□□ -0.62
NECAP1-223	ENST00000640091	OR6B3	Q8NGW1	331 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms