RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 GPATCH3Q96I76 525 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 PDLIM2Q96JY6 352 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 MRPS18AQ9NVS2 196 aaKnown RBP6.29□□□□□ -1.4
CCDC7-216ENST00000640058 LUC7L2Q9Y383 392 aaKnown RBP6.29□□□□□ -1.4
CCDC7-216ENST00000640058 SPEF1Q9Y4P9 236 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 POLRMTO00411 1230 aaKnown RBP6.28□□□□□ -1.4
CCDC7-216ENST00000640058 GJB1P08034 283 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 CHRM3P20309 590 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 FOLR3P41439 243 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 ZNF135P52742 658 aaPredicted RBP6.28□□□□□ -1.4
CCDC7-216ENST00000640058 PEG10Q86TG7 708 aaKnown RBP6.28□□□□□ -1.4
CCDC7-216ENST00000640058 SH2D3CQ8N5H7 860 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 FAM98AQ8NCA5 519 aaKnown RBP6.28□□□□□ -1.4
CCDC7-216ENST00000640058 MYCBPAPQ8TBZ2 947 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 HEPHQ9BQS7 1158 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 KLK15Q9H2R5 256 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 ASB6Q9NWX5 421 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 ABCF2Q9UG63 623 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 NEU2Q9Y3R4 380 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 COX11Q9Y6N1 276 aa6.28□□□□□ -1.4
CCDC7-216ENST00000640058 DTNBO60941 627 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 VPS4BO75351 444 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 FTLP02792 175 aaPredicted RBP6.27□□□□□ -1.41
CCDC7-216ENST00000640058 SRGNP10124 158 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 PIK3CGP48736 1102 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 MAPK10P53779 464 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 NOGQ13253 232 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 CCDC142Q17RM4 750 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 AKNAD1Q5T1N1 836 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 SYCE2Q6PIF2 218 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 HEATR3Q7Z4Q2 680 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 B3GALNT2Q8NCR0 500 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 TNPO1Q92973 898 aaKnown RBP6.27□□□□□ -1.41
CCDC7-216ENST00000640058 LRFN3Q9BTN0 628 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 SMOC2Q9H3U7 446 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 GNL3LQ9NVN8 582 aaKnown RBP6.27□□□□□ -1.41
CCDC7-216ENST00000640058 AGAP1Q9UPQ3 857 aa6.27□□□□□ -1.41
CCDC7-216ENST00000640058 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.27□□□□□ -1.41
CCDC7-216ENST00000640058 ANKRD62A6NC57 917 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 IGLV2-14P01704 120 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 ANXA1P04083 346 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 ZNF37AP17032 561 aaPredicted RBP6.26□□□□□ -1.41
CCDC7-216ENST00000640058 PRDX5P30044 214 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 CYP2C19P33261 490 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 NPTX2P47972 431 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 HNRNPMP52272 730 aaKnown RBP eCLIP6.26□□□□□ -1.41
CCDC7-216ENST00000640058 CACNA2D1P54289 1103 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 POU6F2P78424 691 aaPredicted RBP6.26□□□□□ -1.41
CCDC7-216ENST00000640058 KAZNQ674X7 775 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 MICALCLQ6ZW33 695 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 USP45Q70EL2 814 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 CPA6Q8N4T0 437 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 SCAMP4Q969E2 229 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 HSPBAP1Q96EW2 488 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 SPATA5L1Q9BVQ7 753 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 SIDT1Q9NXL6 827 aaKnown RBP6.26□□□□□ -1.41
CCDC7-216ENST00000640058 CFAP97Q9P2B7 532 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 FEZ2Q9UHY8 353 aaPredicted RBP6.26□□□□□ -1.41
CCDC7-216ENST00000640058 POLHQ9Y253 713 aa6.26□□□□□ -1.41
CCDC7-216ENST00000640058 PRSS29PA6NIE9 313 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 ADM5C9JUS6 153 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 KIF20AO95235 890 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 MATN4O95460 622 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 IBSPP21815 317 aaPredicted RBP6.25□□□□□ -1.41
CCDC7-216ENST00000640058 LPOP22079 712 aaPredicted RBP6.25□□□□□ -1.41
CCDC7-216ENST00000640058 FBLP22087 321 aaKnown RBP6.25□□□□□ -1.41
CCDC7-216ENST00000640058 CD38P28907 300 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 MAP2K6P52564 334 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 ELLP55199 621 aaPredicted RBP6.25□□□□□ -1.41
CCDC7-216ENST00000640058 C21orf58P58505 322 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 TMEM240Q5SV17 173 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 FAM90A1Q86YD7 464 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 PDSS2Q86YH6 399 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 PSD4Q8NDX1 1056 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 ZNF384Q8TF68 577 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 CHMP4CQ96CF2 233 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 GTPBP4Q9BZE4 634 aaKnown RBP6.25□□□□□ -1.41
CCDC7-216ENST00000640058 AASDHPPTQ9NRN7 309 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 LMBRD1Q9NUN5 540 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 ETAA1Q9NY74 926 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 SLC17A6Q9P2U8 582 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 IP6K2Q9UHH9 426 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 NR2E3Q9Y5X4 410 aa6.25□□□□□ -1.41
CCDC7-216ENST00000640058 A0A0B4J269 797 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 LRRC3CA6NJW4 275 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 F5H697 171 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 MPPED1O15442 326 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 PROM1O43490 865 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 AHSGP02765 367 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 POU2F2P09086 479 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 RARBP10826 455 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 NEK2P51955 445 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 HK3P52790 923 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 TUBB3Q13509 450 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 HLXQ14774 488 aaPredicted RBP6.24□□□□□ -1.41
CCDC7-216ENST00000640058 TXNRD1Q16881 649 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 CCDC157Q569K6 752 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 THEMIS2Q5TEJ8 643 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 KIAA0895LQ68EN5 471 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms