RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 ARSHQ5FYA8 562 aa15.91■□□□□ 0.14
TARDBP-231ENST00000639599 SPATA1Q5VX52 437 aa15.91■□□□□ 0.14
TARDBP-231ENST00000639599 MAP4K3Q8IVH8 894 aa15.91■□□□□ 0.14
TARDBP-231ENST00000639599 MFSD6LQ8IWD5 586 aa15.91■□□□□ 0.14
TARDBP-231ENST00000639599 MAML2Q8IZL2 1156 aaPredicted RBP15.91■□□□□ 0.14
TARDBP-231ENST00000639599 CLDN23Q96B33 292 aa15.91■□□□□ 0.14
TARDBP-231ENST00000639599 SENP8Q96LD8 212 aa15.91■□□□□ 0.14
TARDBP-231ENST00000639599 FAM126AQ9BYI3 521 aaPredicted RBP15.91■□□□□ 0.14
TARDBP-231ENST00000639599 HAPLN2Q9GZV7 340 aa15.91■□□□□ 0.14
TARDBP-231ENST00000639599 SMG5Q9UPR3 1016 aaKnown RBP15.91■□□□□ 0.14
TARDBP-231ENST00000639599 EXOC7Q9UPT5 735 aa15.91■□□□□ 0.14
TARDBP-231ENST00000639599 DERAQ9Y315 318 aa15.91■□□□□ 0.14
TARDBP-231ENST00000639599 DOCK8Q8NF50 2099 aa15.91■□□□□ 0.14
TARDBP-231ENST00000639599 VWA8A3KMH1 1905 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 A0A0B4J269 797 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 MTMR11A4FU01 709 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 NFICP08651 508 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 PDCP20941 246 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 TUFMP49411 452 aaKnown RBP15.9■□□□□ 0.14
TARDBP-231ENST00000639599 TAF6P49848 677 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 EPHA5P54756 1037 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 LILRA4P59901 499 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 MTAPQ13126 283 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 PUM1Q14671 1186 aaKnown RBP eCLIP15.9■□□□□ 0.14
TARDBP-231ENST00000639599 SLC39A12Q504Y0 691 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 C9orf57Q5W0N0 161 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 TSSK4Q6SA08 328 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 SHKBP1Q8TBC3 707 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 POMGNT1Q8WZA1 660 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 ZSWIM3Q96MP5 696 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 PYM1Q9BRP8 204 aaKnown RBP15.9■□□□□ 0.14
TARDBP-231ENST00000639599 ASB7Q9H672 318 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 LMAN1LQ9HAT1 526 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 TRPV5Q9NQA5 729 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 CPSF3Q9UKF6 684 aaKnown RBP15.9■□□□□ 0.14
TARDBP-231ENST00000639599 AGO2Q9UKV8 859 aaKnown RBP15.9■□□□□ 0.14
TARDBP-231ENST00000639599 SLC27A5Q9Y2P5 690 aa15.9■□□□□ 0.14
TARDBP-231ENST00000639599 R3HCC1Q9Y3T6 440 aaKnown RBP15.9■□□□□ 0.14
TARDBP-231ENST00000639599 PTPRZ1P23471 2315 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-231ENST00000639599 SDHBP21912 280 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 CCNE1P24864 410 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 GABRR2P28476 465 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 CDC25CP30307 473 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 NMT1P30419 496 aaKnown RBP15.89■□□□□ 0.13
TARDBP-231ENST00000639599 ACOT2P49753 483 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 ZNF131P52739 623 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 POSTNQ15063 836 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 ZBTB6Q15916 424 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 GPR158Q5T848 1215 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 CENPPQ6IPU0 288 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 DCLK2Q8N568 766 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 ATAD1Q8NBU5 361 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 KCNN1Q92952 543 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 RMDN1Q96DB5 314 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 ZNF560Q96MR9 790 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 CHRDQ9H2X0 955 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 C8orf33Q9H7E9 229 aaPredicted RBP15.89■□□□□ 0.13
TARDBP-231ENST00000639599 TRPV4Q9HBA0 871 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 PRMT8Q9NR22 394 aaPredicted RBP15.89■□□□□ 0.13
TARDBP-231ENST00000639599 BLOC1S4Q9NUP1 217 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 THG1LQ9NWX6 298 aaKnown RBP15.89■□□□□ 0.13
TARDBP-231ENST00000639599 USP18Q9UMW8 372 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 C2CD2Q9Y426 696 aa15.89■□□□□ 0.13
TARDBP-231ENST00000639599 CYB561D2O14569 222 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 PPEF2O14830 753 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 CHADO15335 359 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 DDIT3P35638 169 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 GTF2BQ00403 316 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 SMARCB1Q12824 385 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 PTPAQ15257 358 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 SV2CQ496J9 727 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 DYMQ7RTS9 669 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 DNAJB7Q7Z6W7 309 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-231ENST00000639599 DCP1BQ8IZD4 617 aaKnown RBP15.88■□□□□ 0.13
TARDBP-231ENST00000639599 TMEM130Q8N3G9 435 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 SUMF1Q8NBK3 374 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 NOC3LQ8WTT2 800 aaKnown RBP15.88■□□□□ 0.13
TARDBP-231ENST00000639599 PSMG2Q969U7 264 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 HVCN1Q96D96 273 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 MRPL44Q9H9J2 332 aaKnown RBP15.88■□□□□ 0.13
TARDBP-231ENST00000639599 STK17AQ9UEE5 414 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 MYH15Q9Y2K3 1946 aa15.88■□□□□ 0.13
TARDBP-231ENST00000639599 SLC38A8A6NNN8 435 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 MOSPD3O75425 235 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 IL18RAPO95256 599 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 PNPLA4P41247 253 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 CXCL12P48061 93 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 TSPY1Q01534 308 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 ARHGAP29Q52LW3 1261 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 ZC2HC1CQ53FD0 456 aaPredicted RBP15.87■□□□□ 0.13
TARDBP-231ENST00000639599 RRAGBQ5VZM2 374 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 PRR23BQ6ZRT6 265 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 TMC8Q8IU68 726 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 ARID3BQ8IVW6 561 aaPredicted RBP15.87■□□□□ 0.13
TARDBP-231ENST00000639599 SYCP3Q8IZU3 236 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 ZBTB44Q8NCP5 570 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 C2orf15Q8WU43 125 aaKnown RBP15.87■□□□□ 0.13
TARDBP-231ENST00000639599 CCSER1Q9C0I3 900 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 DNAJC25Q9H1X3 360 aa15.87■□□□□ 0.13
TARDBP-231ENST00000639599 EPC1Q9H2F5 836 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms