RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 APBA1Q02410 837 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 ELAVL2Q12926 359 aaKnown RBP11.02□□□□□ -0.65
LINC00598-216ENST00000638163 MBTPS1Q14703 1052 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 TCEAL1Q15170 157 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 NOMO2Q5JPE7 1267 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 CCDC122Q5T0U0 273 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 TMEM270Q6UE05 265 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.02□□□□□ -0.65
LINC00598-216ENST00000638163 NYAP1Q6ZVC0 841 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 H2AFVQ71UI9 128 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 ZNF571Q7Z3V5 609 aaPredicted RBP11.02□□□□□ -0.65
LINC00598-216ENST00000638163 RHOT2Q8IXI1 618 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 SLC30A5Q8TAD4 765 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 CTNNBL1Q8WYA6 563 aaPredicted RBP11.02□□□□□ -0.65
LINC00598-216ENST00000638163 PAWRQ96IZ0 340 aaKnown RBP11.02□□□□□ -0.65
LINC00598-216ENST00000638163 ZMAT2Q96NC0 199 aaKnown RBP11.02□□□□□ -0.65
LINC00598-216ENST00000638163 FAM193BQ96PV7 902 aaPredicted RBP11.02□□□□□ -0.65
LINC00598-216ENST00000638163 MMS19Q96T76 1030 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 GAD1Q99259 594 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 NT5C1AQ9BXI3 368 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 LHX5Q9H2C1 402 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 PDCL3Q9H2J4 239 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 NXF1Q9UBU9 619 aaKnown RBP11.02□□□□□ -0.65
LINC00598-216ENST00000638163 NOCTQ9UK39 431 aaKnown RBP11.02□□□□□ -0.65
LINC00598-216ENST00000638163 STRIP2Q9ULQ0 834 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 PCDHGC3Q9UN70 934 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 PAXBP1Q9Y5B6 917 aa11.02□□□□□ -0.65
LINC00598-216ENST00000638163 A0A087X0T9 212 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 MGEA5O60502 916 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 NBNO60934 754 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 FAM228BP0C875 321 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 VDRP11473 427 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 ODC1P11926 461 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 RAG1P15918 1043 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 AARSP49588 968 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC00598-216ENST00000638163 SLC8A3P57103 927 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 ETF1P62495 437 aaKnown RBP11.01□□□□□ -0.65
LINC00598-216ENST00000638163 MLLT1Q03111 559 aaPredicted RBP11.01□□□□□ -0.65
LINC00598-216ENST00000638163 GFPT1Q06210 699 aaPredicted RBP11.01□□□□□ -0.65
LINC00598-216ENST00000638163 DNTTIP2Q5QJE6 756 aaKnown RBP11.01□□□□□ -0.65
LINC00598-216ENST00000638163 MFSD5Q6N075 450 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 DCLRE1AQ6PJP8 1040 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 LIMS2Q7Z4I7 341 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 METTL23Q86XA0 190 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 REXO1L1PQ8IX06 675 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 SYCE1Q8N0S2 351 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 TMEM35BQ8NCS4 154 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 DBF4BQ8NFT6 615 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 KIF18AQ8NI77 898 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 SECISBP2LQ93073 1101 aaKnown RBP11.01□□□□□ -0.65
LINC00598-216ENST00000638163 TMEM176AQ96HP8 235 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 TMEM175Q9BSA9 504 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 HTATIP2Q9BUP3 242 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 ISCUQ9H1K1 167 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 TUBGCP4Q9UGJ1 667 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 AJAP1Q9UKB5 411 aaPredicted RBP11.01□□□□□ -0.65
LINC00598-216ENST00000638163 NENFQ9UMX5 172 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 SNX9Q9Y5X1 595 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 ANK1P16157 1881 aa11.01□□□□□ -0.65
LINC00598-216ENST00000638163 BRCA2P51587 3418 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 PODXLO00592 558 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 ENPP3O14638 875 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 CALB1P05937 261 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 PLEKP08567 350 aaPredicted RBP11□□□□□ -0.65
LINC00598-216ENST00000638163 SETSIPP0DME0 302 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 WARSP23381 471 aaKnown RBP11□□□□□ -0.65
LINC00598-216ENST00000638163 PCSK1P29120 753 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 CDH5P33151 784 aaPredicted RBP11□□□□□ -0.65
LINC00598-216ENST00000638163 NSFP46459 744 aaKnown RBP11□□□□□ -0.65
LINC00598-216ENST00000638163 SCNN1GP51170 649 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 HADHBP55084 474 aaKnown RBP11□□□□□ -0.65
LINC00598-216ENST00000638163 LILRA4P59901 499 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 CENPCQ03188 943 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 TAP1Q03518 808 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 PPIGQ13427 754 aaKnown RBP eCLIP11□□□□□ -0.65
LINC00598-216ENST00000638163 MTF1Q14872 753 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 MAPRE1Q15691 268 aaKnown RBP11□□□□□ -0.65
LINC00598-216ENST00000638163 UPP1Q16831 310 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 SGO2Q562F6 1265 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 GLRA4Q5JXX5 417 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 SPOPLQ6IQ16 392 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 UBE2Q1Q7Z7E8 422 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 NOP9Q86U38 636 aaKnown RBP11□□□□□ -0.65
LINC00598-216ENST00000638163 SLC47A2Q86VL8 602 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 GLYCTKQ8IVS8 523 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 LRRC43Q8N309 656 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 ACRBPQ8NEB7 543 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 GSTCDQ8NEC7 633 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 RFFLQ8WZ73 363 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 ZFP42Q96MM3 310 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 DESI2Q9BSY9 194 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 SNX25Q9H3E2 840 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 CYLDQ9NQC7 956 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 SEPT11Q9NVA2 429 aaKnown RBP11□□□□□ -0.65
LINC00598-216ENST00000638163 TRMT1Q9NXH9 659 aaKnown RBP11□□□□□ -0.65
LINC00598-216ENST00000638163 KLK14Q9P0G3 267 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 UVRAGQ9P2Y5 699 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 GTF3C4Q9UKN8 822 aa11□□□□□ -0.65
LINC00598-216ENST00000638163 SCINQ9Y6U3 715 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms