RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 HERPUD2Q9BSE4 406 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 PORCNQ9H237 461 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 TMEM134Q9H6X4 195 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 ECT2Q9H8V3 914 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 NOD2Q9HC29 1040 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 DNAJC17Q9NVM6 304 aaKnown RBP13.48□□□□□ -0.25
TCF4-289ENST00000637941 CTNNAL1Q9UBT7 734 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 SMG5Q9UPR3 1016 aaKnown RBP13.48□□□□□ -0.25
TCF4-289ENST00000637941 USTQ9Y2C2 406 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 DOCK5Q9H7D0 1870 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 EXOC1LA0A1B0GW35 172 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 RASA4BC9J798 803 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 RASA4O43374 803 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 LIASO43766 372 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 VNN1O95497 513 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 KRT1P04264 644 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 NQO1P15559 274 aaKnown RBP13.48□□□□□ -0.25
TCF4-289ENST00000637941 CD58P19256 250 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 RPS12P25398 132 aaKnown RBP13.48□□□□□ -0.25
TCF4-289ENST00000637941 DSG3P32926 999 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 RFC5P40937 340 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 BACE1P56817 501 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 BNIP1Q12981 228 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 GRM1Q13255 1194 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
TCF4-289ENST00000637941 MTFR1Q15390 333 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 LMBRD2Q68DH5 695 aaPredicted RBP13.48□□□□□ -0.25
TCF4-289ENST00000637941 PCGF5Q86SE9 256 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 GDAP1Q8TB36 358 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 FBF1Q8TES7 1133 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 TEPSINQ96N21 525 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 FRMD8P1Q9BZ68 369 aaPredicted RBP13.48□□□□□ -0.25
TCF4-289ENST00000637941 ZNF518BQ9C0D4 1074 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 ZNF148Q9UQR1 794 aa13.48□□□□□ -0.25
TCF4-289ENST00000637941 LRRIQ4A6NIV6 560 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 SPATA31C2B4DYI2 1134 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 PRPF4O43172 522 aaKnown RBP eCLIP13.47□□□□□ -0.25
TCF4-289ENST00000637941 ATP5HO75947 161 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 OATP04181 439 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 MMP8P22894 467 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 GJC1P36383 396 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 ACOT2P49753 483 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 PIGHQ14442 188 aaPredicted RBP13.47□□□□□ -0.25
TCF4-289ENST00000637941 ZNF268Q14587 947 aaPredicted RBP13.47□□□□□ -0.25
TCF4-289ENST00000637941 RASA2Q15283 850 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 SPOPLQ6IQ16 392 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 ANKS1BQ7Z6G8 1248 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 PHLDB2Q86SQ0 1253 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 TBC1D1Q86TI0 1168 aaPredicted RBP13.47□□□□□ -0.25
TCF4-289ENST00000637941 PASD1Q8IV76 773 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 SLITRK1Q96PX8 696 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 PHACTR1Q9C0D0 580 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 ACAD9Q9H845 621 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 ZNF302Q9NR11 478 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 PRKAG3Q9UGI9 489 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 BAIAP2L1Q9UHR4 511 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 MCM8Q9UJA3 840 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 SHOC2Q9UQ13 582 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 CEP83Q9Y592 693 aa13.47□□□□□ -0.25
TCF4-289ENST00000637941 CALCAP01258 141 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 NCALDP61601 193 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 NCOA4Q13772 614 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 TMED2Q15363 201 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 SURF1Q15526 300 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 DNAJC24Q6P3W2 148 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 CENPUQ71F23 418 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 PNMA8AQ86V59 439 aaPredicted RBP13.46□□□□□ -0.25
TCF4-289ENST00000637941 ALLCQ8N6M5 410 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 TMEM35BQ8NCS4 154 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 TCP11Q8WWU5 503 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 ELMO3Q96BJ8 720 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 C9orf72Q96LT7 481 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 PITPNM3Q9BZ71 974 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 DHX33Q9H6R0 707 aaKnown RBP13.46□□□□□ -0.25
TCF4-289ENST00000637941 APOBEC3GQ9HC16 384 aaKnown RBP13.46□□□□□ -0.25
TCF4-289ENST00000637941 SAYSD1Q9NPB0 183 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 EURLQ9NYK6 297 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 TBK1Q9UHD2 729 aa13.46□□□□□ -0.25
TCF4-289ENST00000637941 A0A0B4J269 797 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 TMEM191CA6NGB0 347 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 TMEM191BP0C7N4 346 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 ZNF132P52740 706 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 ZNF280AP59817 542 aaPredicted RBP13.46□□□□□ -0.26
TCF4-289ENST00000637941 YWHAEP62258 255 aaKnown RBP13.46□□□□□ -0.26
TCF4-289ENST00000637941 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.26
TCF4-289ENST00000637941 SPARCL1Q14515 664 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 SETDB1Q15047 1291 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 DCUN1D2Q6PH85 259 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 FAM228AQ86W67 206 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 SCYL3Q8IZE3 742 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 REPS2Q8NFH8 660 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 ZNF606Q8WXB4 792 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 KLHL29Q96CT2 875 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 C12orf42Q96LP6 360 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 RAB3IPQ96QF0 476 aaPredicted RBP13.46□□□□□ -0.26
TCF4-289ENST00000637941 SMC6Q96SB8 1091 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 PICK1Q9NRD5 415 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 TXLNGQ9NUQ3 528 aa13.46□□□□□ -0.26
TCF4-289ENST00000637941 SLC24A2Q9UI40 661 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms