RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SPTBN2O15020 2390 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 RPTORQ8N122 1335 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 H3BRJ5 948 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 SEPT4O43236 478 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 PALMO75781 387 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 STAMBPO95630 424 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 VTNP04004 478 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 GYPCP04921 128 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 SLC9A1P19634 815 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 PON1P27169 355 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 EPHB4P54760 987 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 PTGISQ16647 500 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 FAM102AQ5T9C2 384 aaPredicted RBP5.84□□□□□ -1.47
CHD2-227ENST00000637572 OLFML2BQ68BL8 750 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 DNAJC14Q6Y2X3 702 aaPredicted RBP5.84□□□□□ -1.47
CHD2-227ENST00000637572 CEP57Q86XR8 500 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 TC2NQ8N9U0 490 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 BRI3BPQ8WY22 251 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 TMEM169Q96HH4 297 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 KIFC3Q9BVG8 833 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 UBE2OQ9C0C9 1292 aaKnown RBP5.84□□□□□ -1.47
CHD2-227ENST00000637572 RIPK3Q9Y572 518 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 TACC3Q9Y6A5 838 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 NCOR1O75376 2440 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 TLDC2A0PJX2 215 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 AP3B1O00203 1094 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 EGFRP00533 1210 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 ITGB3P05106 788 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 SMIM10L2AP0DMW4 78 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 SMIM10L2BP0DMW5 78 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 CAPN2P17655 700 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 PTENP60484 403 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 MRPS9P82933 396 aaKnown RBP5.84□□□□□ -1.47
CHD2-227ENST00000637572 CDR2Q01850 454 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 FBXO46Q6PJ61 603 aaPredicted RBP5.84□□□□□ -1.47
CHD2-227ENST00000637572 MTHFD1LQ6UB35 978 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 ANKS4BQ8N8V4 417 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 TMEM161BQ8NDZ6 487 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 STKLD1Q8NE28 680 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 WHAMMQ8TF30 809 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 DNAJB3Q8WWF6 145 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 TBC1D31Q96DN5 1066 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 TTC1Q99614 292 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 OSMRQ99650 979 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 TRIM31Q9BZY9 425 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 CCSER2Q9H7U1 834 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 DERAQ9Y315 318 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 SGK1O00141 431 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 FBXO21O94952 628 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 FTCDO95954 541 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 FAM200BP0CF97 657 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 SLURP2P0DP57 97 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 CHRNA3P32297 505 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 GRK4P32298 578 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 FXR1P51114 621 aaKnown RBP eCLIP5.84□□□□□ -1.485e-6■■■□□ 17
CHD2-227ENST00000637572 HIRAP54198 1017 aaPredicted RBP5.84□□□□□ -1.48
CHD2-227ENST00000637572 MRPS6P82932 125 aaKnown RBP5.84□□□□□ -1.48
CHD2-227ENST00000637572 PTPN11Q06124 597 aaPredicted RBP5.84□□□□□ -1.48
CHD2-227ENST00000637572 NCAPHQ15003 741 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 LINC01559Q495D7 138 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 KAZNQ674X7 775 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 CASC4Q6P4E1 433 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 ARHGEF18Q6ZSZ5 1173 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 SYDE1Q6ZW31 735 aaPredicted RBP5.84□□□□□ -1.48
CHD2-227ENST00000637572 SV2AQ7L0J3 742 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 TMEM86AQ8N2M4 240 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 AFAP1L2Q8N4X5 818 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 SH3TC2Q8TF17 1288 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 MMTAG2Q9BU76 263 aaKnown RBP5.84□□□□□ -1.48
CHD2-227ENST00000637572 SLITRK6Q9H5Y7 841 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 ZWILCHQ9H900 591 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 STK39Q9UEW8 545 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.84□□□□□ -1.48
CHD2-227ENST00000637572 GNEQ9Y223 722 aaKnown RBP5.84□□□□□ -1.48
CHD2-227ENST00000637572 PCDHGB7Q9Y5F8 929 aa5.84□□□□□ -1.48
CHD2-227ENST00000637572 LRP5O75197 1615 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 A0A087X0B3 334 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 GPR25O00155 361 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 KLRC4O43908 158 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 ATP9AO75110 1047 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 ZBED1O96006 694 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 SLC2A3P11169 496 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 GLRA2P23416 452 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 OR1G1P47890 313 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 SLC12A2P55011 1212 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 ELF2Q15723 593 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 FBXO47Q5MNV8 452 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 LMBRD2Q68DH5 695 aaPredicted RBP5.83□□□□□ -1.48
CHD2-227ENST00000637572 DARS2Q6PI48 645 aaKnown RBP5.83□□□□□ -1.48
CHD2-227ENST00000637572 RCOR2Q8IZ40 523 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 CCDC63Q8NA47 563 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 PARD3BQ8TEW8 1205 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 VCPIP1Q96JH7 1222 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 CELF4Q9BZC1 486 aaKnown RBP5.83□□□□□ -1.48
CHD2-227ENST00000637572 FKBPLQ9UIM3 349 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 DOLKQ9UPQ8 538 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 C2CD2Q9Y426 696 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 SYNJ2BP-COX16A0A087WUM0 186 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 CCDC151A5D8V7 595 aa5.83□□□□□ -1.48
CHD2-227ENST00000637572 FAM187AA6NFU0 413 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms