RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 C2orf40Q9H1Z8 148 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 HOXC10Q9NYD6 342 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 RNF103-CHMP3A0A140T963 221 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 TRIM49D1C9J1S8 452 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 PFDN6O15212 129 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 RARAP10276 462 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 TAL1P17542 331 aaPredicted RBP16.66■□□□□ 0.26
CLN5-218ENST00000637397 PHKA2P46019 1235 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 KCNA1Q09470 495 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 CNGA3Q16281 694 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 C11orf63Q6NUN7 778 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 PRPF39Q86UA1 669 aaKnown RBP16.66■□□□□ 0.26
CLN5-218ENST00000637397 CD302Q8IX05 232 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 TULP2O00295 520 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 ATP9BO43861 1147 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 BRD2P25440 801 aaKnown RBP16.66■□□□□ 0.26
CLN5-218ENST00000637397 TNFRSF8P28908 595 aa16.66■□□□□ 0.26
CLN5-218ENST00000637397 ZKSCAN4Q969J2 545 aaPredicted RBP16.66■□□□□ 0.26
CLN5-218ENST00000637397 NAF1Q96HR8 494 aaKnown RBP16.66■□□□□ 0.26
CLN5-218ENST00000637397 RIC1Q4ADV7 1423 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 SPDYE16A6NNV3 312 aaPredicted RBP16.65■□□□□ 0.26
CLN5-218ENST00000637397 NEMP1O14524 444 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 OATP04181 439 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 TNFAIP2Q03169 654 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 SPDYE2Q495Y8 402 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 MTDHQ86UE4 582 aaKnown RBP16.65■□□□□ 0.26
CLN5-218ENST00000637397 ACAD9Q9H845 621 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 WDR35Q9P2L0 1181 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 HNRNPH3P31942 346 aaKnown RBP16.65■□□□□ 0.26
CLN5-218ENST00000637397 CASP5P51878 434 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 SGSM1Q2NKQ1 1148 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 MROH9Q5TGP6 573 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 AADACL2Q6P093 401 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 MREGQ8N565 214 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 TATDN2Q93075 761 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 AGAP3Q96P47 875 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 ENTPD3O75355 529 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 PRKCBP05771 671 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 TAC1P20366 129 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 ADORA2BP29275 332 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 STAT5BP51692 787 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 SNRPFP62306 86 aaKnown RBP16.65■□□□□ 0.26
CLN5-218ENST00000637397 PRKCEQ02156 737 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 FUT2Q10981 343 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 CYTH1Q15438 398 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 CHI3L2Q15782 390 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 YTHDF3Q7Z739 585 aaKnown RBP16.65■□□□□ 0.26
CLN5-218ENST00000637397 KRT35Q92764 455 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 PGBD4Q96DM1 585 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 SHCBP1LQ9BZQ2 653 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 E2F8A0AVK6 867 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 EFNA5P52803 228 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 TEKT4Q8WW24 435 aa16.65■□□□□ 0.26
CLN5-218ENST00000637397 DCPSQ96C86 337 aaKnown RBP16.65■□□□□ 0.26
CLN5-218ENST00000637397 TOPORSQ9NS56 1045 aaPredicted RBP16.65■□□□□ 0.26
CLN5-218ENST00000637397 SPATA31A1Q5TZJ5 1347 aa16.64■□□□□ 0.26
CLN5-218ENST00000637397 IGSF9BQ9UPX0 1349 aa16.64■□□□□ 0.26
CLN5-218ENST00000637397 ARHGAP10A1A4S6 786 aa16.64■□□□□ 0.26
CLN5-218ENST00000637397 DNAJC6O75061 913 aa16.64■□□□□ 0.26
CLN5-218ENST00000637397 SHBGP04278 402 aa16.64■□□□□ 0.26
CLN5-218ENST00000637397 KCNT1Q5JUK3 1230 aa16.64■□□□□ 0.26
CLN5-218ENST00000637397 ELMO3Q96BJ8 720 aa16.64■□□□□ 0.26
CLN5-218ENST00000637397 CLMNQ96JQ2 1002 aa16.64■□□□□ 0.26
CLN5-218ENST00000637397 ABCF3Q9NUQ8 709 aa16.64■□□□□ 0.26
CLN5-218ENST00000637397 POLLQ9UGP5 575 aa16.64■□□□□ 0.26
CLN5-218ENST00000637397 PSTPIP1O43586 416 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 ATXN3P54252 364 aaPredicted RBP16.64■□□□□ 0.25
CLN5-218ENST00000637397 EMC2Q15006 297 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 SEZ6Q53EL9 994 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 IQCKQ8N0W5 287 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 EIF1ADQ8N9N8 165 aaKnown RBP16.64■□□□□ 0.25
CLN5-218ENST00000637397 ACER1Q8TDN7 264 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 KIF9Q9HAQ2 790 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 EXTL3O43909 919 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 NME3Q13232 169 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 FAXCQ5TGI0 409 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 C4orf50Q6ZRC1 276 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 INPP4AQ96PE3 977 aaPredicted RBP16.64■□□□□ 0.25
CLN5-218ENST00000637397 TMEM121Q9BTD3 319 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 A8MXQ7 604 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 ZNF263O14978 683 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 MTMR2Q13614 643 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 Q4G0T1 1027 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 RNF135Q8IUD6 432 aa16.64■□□□□ 0.25
CLN5-218ENST00000637397 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 FAM86B1E9PN63 330 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 FAM86B2P0C5J1 330 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 CUL2Q13617 745 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 FASTKD1Q53R41 847 aaKnown RBP16.63■□□□□ 0.25
CLN5-218ENST00000637397 FBXO36Q8NEA4 188 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 MOV10L1Q9BXT6 1211 aaKnown RBP16.63■□□□□ 0.25
CLN5-218ENST00000637397 DCLRE1BQ9H816 532 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 PAK5Q9P286 719 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 MCF2P10911 925 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 PMLP29590 882 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 CBWD6Q4V339 395 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 CBWD3Q5JTY5 395 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 HABP4Q5JVS0 413 aaKnown RBP16.63■□□□□ 0.25
CLN5-218ENST00000637397 CBWD5Q5RIA9 395 aa16.63■□□□□ 0.25
CLN5-218ENST00000637397 SPAG6O75602 509 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms