RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CEP97Q8IW35 865 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 UNC45BQ8IWX7 931 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 CCDC33Q8N5R6 958 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 PCSK9Q8NBP7 692 aaKnown RBP3.28□□□□□ -1.88
VIM-210ENST00000637053 ZBTB34Q8NCN2 500 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 ZBTB44Q8NCP5 570 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 OR6C4Q8NGE1 309 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 PLBD2Q8NHP8 589 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 FBXO27Q8NI29 283 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 CTCFLQ8NI51 663 aaPredicted RBP3.28□□□□□ -1.88
VIM-210ENST00000637053 NOC3LQ8WTT2 800 aaKnown RBP3.28□□□□□ -1.88
VIM-210ENST00000637053 TBC1D22AQ8WUA7 517 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 CYB5D2Q8WUJ1 264 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 TRAPPC12Q8WVT3 735 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 TEKT4Q8WW24 435 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 SGCDQ92629 289 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 LRRC45Q96CN5 670 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 TIGD1Q96MW7 591 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 TMEM237Q96Q45 408 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 WDR24Q96S15 920 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 CRACR2AQ9BSW2 395 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 ACAT2Q9BWD1 397 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 FOXP3Q9BZS1 431 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 RNF38Q9H0F5 515 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 NT5C3AQ9H0P0 336 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 MRPL46Q9H2W6 279 aaKnown RBP3.28□□□□□ -1.88
VIM-210ENST00000637053 FAM204AQ9H8W3 233 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 CERS4Q9HA82 394 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 HAUS2Q9NVX0 235 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 TBC1D14Q9P2M4 693 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 GRHPRQ9UBQ7 328 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 SUSD2Q9UGT4 822 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 MOSPD1Q9UJG1 213 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 VPS28Q9UK41 221 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 PTBP2Q9UKA9 531 aaKnown RBP3.28□□□□□ -1.88
VIM-210ENST00000637053 SLC13A4Q9UKG4 626 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 RIMKLBQ9ULI2 386 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 ZNRF3Q9ULT6 936 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 EDARQ9UNE0 448 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 PLA2G2DQ9UNK4 145 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 TLR6Q9Y2C9 796 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 TMED5Q9Y3A6 229 aa3.28□□□□□ -1.88
VIM-210ENST00000637053 CFAP65Q6ZU64 1925 aaKnown RBP3.28□□□□□ -1.88
VIM-210ENST00000637053 A0A0G2JPF8 293 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 CTAGE9A4FU28 777 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 NUDT19A8MXV4 375 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 HNRNPCL3B7ZW38 293 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 DDX39AO00148 427 aaKnown RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 CYR61O00622 381 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 RNF113AO15541 343 aaKnown RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 THAP12O43422 761 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 DAB1O75553 588 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 OFD1O75665 1012 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 YEATS4O95619 227 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 ADCY5O95622 1261 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 S100A6P06703 90 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 C6orf222P0C671 652 aaPredicted RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 RHOXF2BP0C7M4 288 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 HNRNPCL4P0DMR1 293 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 RLBP1P12271 317 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 SCG2P13521 617 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 TNFSF4P23510 183 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 GUCY2CP25092 1073 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 PSMA4P25789 261 aaKnown RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 MAPK3P27361 379 aaPredicted RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 S100A5P33763 92 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 CA8P35219 290 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 HOXD13P35453 343 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 SOX6P35712 828 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 EPS15P42566 896 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 MSH2P43246 934 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 CEBPAP49715 358 aaPredicted RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 NR1H2P55055 460 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 SLC26A5P58743 744 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 RTP1P59025 263 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 KRT85P78386 507 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 IRX1P78414 480 aaPredicted RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 NUCB2P80303 420 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 BEX3Q00994 111 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 CD83Q01151 205 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 DEUP1Q05D60 604 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 TFCP2Q12800 502 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 SLC14A1Q13336 389 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 KLF1Q13351 362 aaPredicted RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 CAMK2GQ13555 558 aaPredicted RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 NEDD9Q14511 834 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 ZNF460Q14592 562 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 RAB3GAP1Q15042 981 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 POSTNQ15063 836 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 KIAA0753Q2KHM9 967 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 ZNF674Q2M3X9 581 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 C15orf59Q2T9L4 293 aaPredicted RBP3.27□□□□□ -1.89
VIM-210ENST00000637053 METTL11BQ5VVY1 283 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 HAUS3Q68CZ6 603 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 MCTP2Q6DN12 878 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 CRIP3Q6Q6R5 217 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 MTHFD1LQ6UB35 978 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 IL27RAQ6UWB1 636 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 RPTNQ6XPR3 784 aa3.27□□□□□ -1.89
VIM-210ENST00000637053 ZNF783Q6ZMS7 281 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms