RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PYCARD	Q9ULZ3	195 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ZKSCAN5	Q9Y2L8	839 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PCDHB4	Q9Y5E5	795 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SNX9	Q9Y5X1	595 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PTPRS	Q13332	1948 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TBKBP1	A7MCY6	615 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TMEM189-UBE2V1	I3L0A0	370 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CILP	O75339	1184 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	FGB	P02675	491 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	KRT5	P13647	590 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CYP11B1	P15538	503 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SYN1	P17600	705 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CD58	P19256	250 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PAX3	P23760	479 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ANXA13	P27216	316 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CDH8	P55286	799 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	RNASEL	Q05823	741 aa	Known RBP	10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	MTF1	Q14872	753 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SOWAHA	Q2M3V2	549 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TDRD12	Q587J7	1177 aa	Known RBP	10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TMEM240	Q5SV17	173 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	DCLRE1A	Q6PJP8	1040 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TMEM270	Q6UE05	265 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	DPH6	Q7L8W6	267 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	OTOP2	Q7RTS6	562 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SLC47A2	Q86VL8	602 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CCDC170	Q8IYT3	715 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	LRRC43	Q8N309	656 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TTC39C	Q8N584	583 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TOP6BL	Q8N6T0	577 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	EPS8L1	Q8TE68	723 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	WHAMM	Q8TF30	809 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	RABGGTA	Q92696	567 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ZNF689	Q96CS4	500 aa	Predicted RBP	10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CCDC42	Q96M95	316 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	MMS19	Q96T76	1030 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	NRDE2	Q9H7Z3	1164 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	DNAJB4	Q9UDY4	337 aa		10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	NOCT	Q9UK39	431 aa	Known RBP	10.25	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TSC2	P49815	1807 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TACC1	O75410	805 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	B3GAT3	O94766	335 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	UPP2	O95045	317 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	KIF4A	O95239	1232 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	NDUFA10	O95299	355 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	LCA5L	O95447	670 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	FAM163B	P0C2L3	166 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CYLC1	P35663	651 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	EIF4A3	P38919	411 aa	Known RBP	10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PDE6C	P51160	858 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	KIF11	P52732	1056 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	BPIFB4	P59827	614 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TIGD5	Q53EQ6	642 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	NOP9	Q86U38	636 aa	Known RBP	10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	APPL2	Q8NEU8	664 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	KIAA1524	Q8TCG1	905 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	KBTBD7	Q8WVZ9	684 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	DDX1	Q92499	740 aa	Known RBP	10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	DPF3	Q92784	378 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	FAM193B	Q96PV7	902 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	MRPL45	Q9BRJ2	306 aa	Known RBP	10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TMEM175	Q9BSA9	504 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ACP6	Q9NPH0	428 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	L1RE1	Q9UN81	338 aa		10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNA1A-223	ENST00000636058	EIF3CL	B5ME19	914 aa	Known RBP	10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058		F8W810	466 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058		M0QZQ0	153 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CYB561D2	O14569	222 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	NRP1	O14786	923 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	HUS1	O60921	280 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ITGB1	P05556	798 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PAEP	P09466	180 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CHRNB2	P17787	502 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	WARS	P23381	471 aa	Known RBP	10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	OR1G1	P47890	313 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	NDST1	P52848	882 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	RAD23B	P54727	409 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CDR2	Q01850	454 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	GFPT1	Q06210	699 aa	Predicted RBP	10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	BMS1	Q14692	1282 aa	Known RBP	10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SLC18A3	Q16572	532 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PAN2	Q504Q3	1202 aa	Known RBP	10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ZNF394	Q53GI3	561 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	DSTYK	Q6XUX3	929 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TOGARAM2	Q6ZUX3	1019 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ZSCAN30	Q86W11	494 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	UNC93A	Q86WB7	457 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ZNF677	Q86XU0	584 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CMTR2	Q8IYT2	770 aa	Known RBP	10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ADGRF2	Q8IZF7	708 aa		10.23	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PDCL2	Q8N4E4	241 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms