RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 DDX3YO15523 660 aaKnown RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 LAMTOR4Q0VGL1 99 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 WDR72Q3MJ13 1102 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 EFCAB12Q6NXP0 572 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 NLRP14Q86W24 1093 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 RFX6Q8HWS3 928 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 NXF1Q9UBU9 619 aaKnown RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SLC24A2Q9UI40 661 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 MYH15Q9Y2K3 1946 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 LGR5O75473 907 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 EDNRBP24530 442 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 HOXD13P35453 343 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ANKRD23Q86SG2 305 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 GPIHBP1Q8IV16 184 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ZNF606Q8WXB4 792 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SEC14L1Q92503 715 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 A0A0G2JLL6 359 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 KRT37O76014 449 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 MMEP08473 750 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 VGLL4Q14135 290 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 TMEM132DQ14C87 1099 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 MMS22LQ6ZRQ5 1243 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 PRRT2Q7Z6L0 340 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 CCDC13Q8IYE1 715 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 HEXIM2Q96MH2 286 aaKnown RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ABHD16BQ9H3Z7 469 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 RRN3Q9NYV6 651 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 MTSS1O43312 755 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 NOMO3P69849 1222 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 CAPSQ13938 189 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 IZUMO3Q5VZ72 239 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 KCTD16Q68DU8 428 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 OR6B2Q6IFH4 312 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 NOTUMQ6P988 496 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SRLQ86TD4 932 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 KCTD6Q8NC69 237 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 P2RX7Q99572 595 aaKnown RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 TACO1Q9BSH4 297 aaKnown RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 POLD4Q9HCU8 107 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 XPNPEP1Q9NQW7 623 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 IGKV6D-21A0A0A0MT36 114 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 H3BQF6 201 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SGK1O00141 431 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SHOX2O60902 331 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 HUS1O60921 280 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SYF2O95926 243 aaKnown RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SLC8A1P32418 973 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 VSIG1Q86XK7 387 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ASCC2Q9H1I8 757 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 PGAP2Q9UHJ9 254 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 TFR2Q9UP52 801 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 RRM1P23921 792 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 CCT5P48643 541 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 R3HDM1Q15032 1099 aaKnown RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 POTEAQ6S8J7 498 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 DPH6Q7L8W6 267 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 TRIM50Q86XT4 487 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 HOMEZQ8IX15 550 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 LMO3Q8TAP4 145 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 CYTH2Q99418 400 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 PCDH9Q9HC56 1237 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 PPANQ9NQ55 473 aaKnown RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ST7Q9NRC1 585 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 EXOC1LA0A1B0GW35 172 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 MEFVO15553 781 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 C4BPAP04003 597 aaKnown RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 DNAJB2P25686 324 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 PTPN7P35236 360 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 PCK1P35558 622 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 MYL6P60660 151 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 CLDN10P78369 228 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ZNF211Q13398 564 aaPredicted RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 CNGA2Q16280 664 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 TFDP3Q5H9I0 405 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 EFHC1Q5JVL4 640 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 LRRC52Q8N7C0 313 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SLC20A1Q8WUM9 679 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ARHGEF26Q96DR7 871 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 PAK5Q9P286 719 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 KRT38O76015 456 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 IFNB1P01574 187 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 CD58P19256 250 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 MSH2P43246 934 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 CPT1AP50416 773 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ATP1A2P50993 1020 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 INHBEP58166 350 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 PTGISQ16647 500 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ARL13BQ3SXY8 428 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SV2CQ496J9 727 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 TSHZ1Q6ZSZ6 1077 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SESTD1Q86VW0 696 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 KIRREL3Q8IZU9 778 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 NME8Q8N427 588 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 KRT35Q92764 455 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ARHGEF2Q92974 986 aaKnown RBP4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ART4Q93070 314 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 CDCA5Q96FF9 252 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 PTPN22Q9Y2R2 807 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 SNCAIPQ9Y6H5 919 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 CFAP73A6NFT4 308 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms