RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 CDHR1Q96JP9 859 aa11.34□□□□□ -0.59
PSPC1-207ENST00000635251 IMPG2Q9BZV3 1241 aa11.34□□□□□ -0.59
PSPC1-207ENST00000635251 GEMIN8Q9NWZ8 242 aaKnown RBP11.34□□□□□ -0.59
PSPC1-207ENST00000635251 MCM8Q9UJA3 840 aa11.34□□□□□ -0.59
PSPC1-207ENST00000635251 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.34□□□□□ -0.59
PSPC1-207ENST00000635251 POC1B-GALNT4F8VUJ3 575 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 LIASO43766 372 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 RGS20O76081 388 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 TJP3O95049 919 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 ARSEP51690 589 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 GNPTABQ3T906 1256 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 HP1BP3Q5SSJ5 553 aaPredicted RBP11.33□□□□□ -0.6
PSPC1-207ENST00000635251 ZBTB41Q5SVQ8 909 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 CRELD2Q6UXH1 353 aaPredicted RBP11.33□□□□□ -0.6
PSPC1-207ENST00000635251 ABHD15Q6UXT9 468 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 CAPN12Q6ZSI9 719 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 RELL1Q8IUW5 271 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 RIBC1Q8N443 379 aaPredicted RBP11.33□□□□□ -0.6
PSPC1-207ENST00000635251 CGRRF1Q99675 332 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 TACO1Q9BSH4 297 aaKnown RBP11.33□□□□□ -0.6
PSPC1-207ENST00000635251 TARS2Q9BW92 718 aaKnown RBP11.33□□□□□ -0.6
PSPC1-207ENST00000635251 PITPNM3Q9BZ71 974 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 FOXP3Q9BZS1 431 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 VPS37BQ9H9H4 285 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 DNPEPQ9ULA0 475 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 ACTL7BQ9Y614 415 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 NFASCO94856 1347 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 ZNF541Q9H0D2 1346 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 FAM47DPA6NHR8 397 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
PSPC1-207ENST00000635251 DNALI1O14645 258 aaPredicted RBP11.33□□□□□ -0.6
PSPC1-207ENST00000635251 SPAG7O75391 227 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 SUPT20HL2P0C7V6 817 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 ZSCAN5DPP0CG00 497 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 RPL7AP62424 266 aaKnown RBP11.33□□□□□ -0.6
PSPC1-207ENST00000635251 BNIP1Q12981 228 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 GPS1Q13098 491 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 SUPT20HL1Q3ZLR7 823 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 SEZ6Q53EL9 994 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 EAPPQ56P03 285 aaPredicted RBP11.33□□□□□ -0.6
PSPC1-207ENST00000635251 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 DCUN1D2Q6PH85 259 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 FAM47EQ6ZV65 393 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 ASAP3Q8TDY4 903 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 HAUS1Q96CS2 278 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 TEPSINQ96N21 525 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 SLITRK1Q96PX8 696 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 FHDC1Q9C0D6 1143 aaPredicted RBP11.33□□□□□ -0.6
PSPC1-207ENST00000635251 HAPLN2Q9GZV7 340 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 RXFP1Q9HBX9 757 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 STK38LQ9Y2H1 464 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 NUB1Q9Y5A7 615 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 STYXL1Q9Y6J8 313 aa11.33□□□□□ -0.6
PSPC1-207ENST00000635251 ABHD2P08910 425 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 ETS1P14921 441 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 KRT15P19012 456 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 PLCB3Q01970 1234 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 NR1H3Q13133 447 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 NCOA4Q13772 614 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 GALNTL6Q49A17 601 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 DNAJC24Q6P3W2 148 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 MFSD7Q6UXD7 560 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 RPAINQ86UA6 219 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 KIF2BQ8N4N8 673 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 FITM2Q8N6M3 262 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 GLIS1Q8NBF1 620 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 OR5B17Q8NGF7 314 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 ZNF606Q8WXB4 792 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 SLC7A3Q8WY07 619 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 GRAMD1AQ96CP6 724 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 MRRFQ96E11 262 aaKnown RBP11.32□□□□□ -0.6
PSPC1-207ENST00000635251 TTC25Q96NG3 672 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 MCEEQ96PE7 176 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 CXorf56Q9H5V9 222 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 ZNF302Q9NR11 478 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 GINM1Q9NU53 330 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 FBXO40Q9UH90 709 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 PNMA3Q9UL41 463 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 RGPD3A6NKT7 1758 aaPredicted RBP11.32□□□□□ -0.6
PSPC1-207ENST00000635251 RGPD4Q7Z3J3 1758 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 CALB1P05937 261 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 TCF4P15884 667 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 PECAM1P16284 738 aaPredicted RBP11.32□□□□□ -0.6
PSPC1-207ENST00000635251 GLRA2P23416 452 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 NAMPTP43490 491 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 ALDH5A1P51649 535 aaPredicted RBP11.32□□□□□ -0.6
PSPC1-207ENST00000635251 RIPK1Q13546 671 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 MTFR1Q15390 333 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 RMDN2Q96LZ7 410 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 STK32BQ9NY57 414 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 PRKAG3Q9UGI9 489 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 IVNS1ABPQ9Y6Y0 642 aa11.32□□□□□ -0.6
PSPC1-207ENST00000635251 ARID2Q68CP9 1835 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 TMEM191CA6NGB0 347 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 SGK1O00141 431 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 ATP2A1O14983 1001 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 IFNB1P01574 187 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 OATP04181 439 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 TMEM191BP0C7N4 346 aa11.31□□□□□ -0.6
PSPC1-207ENST00000635251 DPEP1P16444 411 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms