RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 INO80B-WBP1J3KQ70 363 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 SASH3O75995 380 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 TNNC2P02585 160 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 LGALS2P05162 132 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 HARSP12081 509 aaKnown RBP7.63□□□□□ -1.19
BRCA1-230ENST00000634433 EPHB4P54760 987 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 YWHAEP62258 255 aaKnown RBP7.63□□□□□ -1.19
BRCA1-230ENST00000634433 CDC42EP1Q00587 391 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 NNTQ13423 1086 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 DRP2Q13474 957 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 TRPC3Q13507 836 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 NCOA4Q13772 614 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 GRB14Q14449 540 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 MAPRE1Q15691 268 aaKnown RBP7.63□□□□□ -1.19
BRCA1-230ENST00000634433 FAM187BQ17R55 369 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 SGSM1Q2NKQ1 1148 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 HSP90B2PQ58FF3 399 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 MFSD4BQ5TF39 518 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 CST9Q5W186 159 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 EMBQ6PCB8 327 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 MAATS1Q7Z4T9 603 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 GPR142Q7Z601 462 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 ZBTB33Q86T24 672 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 DNAAF5Q86Y56 855 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 RELL1Q8IUW5 271 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 EIF1ADQ8N9N8 165 aaKnown RBP7.63□□□□□ -1.19
BRCA1-230ENST00000634433 DDX1Q92499 740 aaKnown RBP7.63□□□□□ -1.19
BRCA1-230ENST00000634433 ANKRD36BP1Q96IX9 119 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 PCDHB18PQ96TA0 734 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 PI4K2AQ9BTU6 479 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 ABHD16BQ9H3Z7 469 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 TNFSF13BQ9Y275 285 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 INPP5FQ9Y2H2 1132 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 PCDHB4Q9Y5E5 795 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 ALG6Q9Y672 507 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 SIP14410 1827 aa7.63□□□□□ -1.19
BRCA1-230ENST00000634433 GOLGA6L10A0A0M3HER8 536 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 KRIT1O00522 736 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 CELF2O95319 508 aaKnown RBP7.62□□□□□ -1.19
BRCA1-230ENST00000634433 VNN1O95497 513 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 C22orf31O95567 290 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 CLTAP09496 248 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 INSRRP14616 1297 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 PROZP22891 400 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 PAK2Q13177 524 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 LIN9Q5TKA1 542 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 PALB2Q86YC2 1186 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 CHCHD4Q8N4Q1 142 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 SLC43A3Q8NBI5 491 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 ZNF653Q96CK0 615 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 FAXDC2Q96IV6 333 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 VCPIP1Q96JH7 1222 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 NLRP4Q96MN2 994 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 ASB16Q96NS5 453 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 KRT12Q99456 494 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 PLVAPQ9BX97 442 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 UBXN6Q9BZV1 441 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 SLITRK6Q9H5Y7 841 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 RPF1Q9H9Y2 349 aaKnown RBP7.62□□□□□ -1.19
BRCA1-230ENST00000634433 FEZ2Q9UHY8 353 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-230ENST00000634433 CPSF3Q9UKF6 684 aaKnown RBP7.62□□□□□ -1.19
BRCA1-230ENST00000634433 CNTN6Q9UQ52 1028 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 UTRNP46939 3433 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 A6NCN8 305 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 RRN3P2A6NIE6 340 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 DDX3YO15523 660 aaKnown RBP7.62□□□□□ -1.19
BRCA1-230ENST00000634433 TSPAN6O43657 245 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 ZEB2O60315 1214 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 B4GALT4O60513 344 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 LILRB3O75022 631 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 ECEL1O95672 775 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 TMEM191BP0C7N4 346 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 FLT3P36888 993 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 NOP14P78316 857 aaKnown RBP7.62□□□□□ -1.19
BRCA1-230ENST00000634433 ZNF568Q3ZCX4 644 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 DUSP28Q4G0W2 176 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 TMEM259Q4ZIN3 620 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 PPP2R2DQ66LE6 453 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 ZNF564Q8TBZ8 553 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-230ENST00000634433 AFG1LQ8WV93 481 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 NUP85Q9BW27 656 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 RNPEPQ9H4A4 650 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 ZCCHC17Q9NP64 241 aaKnown RBP7.62□□□□□ -1.19
BRCA1-230ENST00000634433 MED4Q9NPJ6 270 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 GDF3Q9NR23 364 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 MRGBPQ9NV56 204 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 SMARCAL1Q9NZC9 954 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 EHD2Q9NZN4 543 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 LCMT1Q9UIC8 334 aa7.62□□□□□ -1.19
BRCA1-230ENST00000634433 NOC2LQ9Y3T9 749 aaKnown RBP7.62□□□□□ -1.19
BRCA1-230ENST00000634433 CCDC66A2RUB6 948 aa7.61□□□□□ -1.19
BRCA1-230ENST00000634433 ENPP3O14638 875 aa7.61□□□□□ -1.19
BRCA1-230ENST00000634433 HEXIM1O94992 359 aaKnown RBP7.61□□□□□ -1.19
BRCA1-230ENST00000634433 SNAI1O95863 264 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-230ENST00000634433 EDN1P05305 212 aa7.61□□□□□ -1.19
BRCA1-230ENST00000634433 HOXC6P09630 235 aa7.61□□□□□ -1.19
BRCA1-230ENST00000634433 MCF2P10911 925 aa7.61□□□□□ -1.19
BRCA1-230ENST00000634433 ACO1P21399 889 aaKnown RBP7.61□□□□□ -1.19
BRCA1-230ENST00000634433 NSFP46459 744 aaKnown RBP7.61□□□□□ -1.19
BRCA1-230ENST00000634433 CLCN3P51790 818 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms