RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 IL2RAP01589 272 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 EPHX1P07099 455 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 HNRNPA1P09651 372 aaKnown RBP eCLIP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 EDN3P14138 238 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 PLCG1P19174 1290 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 AGXTP21549 392 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 KCNA5P22460 613 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 AKT1P31749 480 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 S100A5P33763 92 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 ARHGAP8P85298 464 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 PTPN11Q06124 597 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CHRNDQ07001 517 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CHAF1BQ13112 559 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 IKQ13123 557 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 DUSP28Q4G0W2 176 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 AARDQ4LEZ3 155 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 MSS51Q4VC12 460 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 USP39Q53GS9 565 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 NBPF12Q5TAG4 269 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 IGSF22Q8N9C0 903 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 MDM1Q8TC05 714 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 DEPDC1BQ8WUY9 529 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 PHF20Q9BVI0 1012 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 GCOM2Q9BZD3 368 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 MMADHCQ9H3L0 296 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 VEZTQ9HBM0 779 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CYP26B1Q9NR63 512 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SEMA3GQ9NS98 782 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SUCLA2Q9P2R7 463 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SLC39A10Q9ULF5 831 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 WDR19Q8NEZ3 1342 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 AQP12BA6NM10 295 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 C16orf96A6NNT2 1141 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 A8MXE2 369 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 HRO43593 1189 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 AFPP02771 609 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 S100A6P06703 90 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SLFN14P0C7P3 912 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 IL10P22301 178 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 JAK1P23458 1154 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 TBXAS1P24557 533 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 GRNP28799 593 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 IL15P40933 162 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 MECP2P51608 486 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 ACTR1AP61163 376 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 ITIH3Q06033 890 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CBX3Q13185 183 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CUL4BQ13620 913 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 DAG1Q14118 895 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 AGERQ15109 404 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 PDCD1Q15116 288 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 TLR1Q15399 786 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 TARBP2Q15633 366 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 GRIK5Q16478 980 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 KCNT1Q5JUK3 1230 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CYP4A22Q5TCH4 519 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SULT6B1Q6IMI4 303 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 ZNF574Q6ZN55 896 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 R3HCC1LQ7Z5L2 792 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SPATA24Q86W54 205 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SCUBE3Q8IX30 993 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CMTR1Q8N1G2 835 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 C10orf53Q8N6V4 93 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 RIN2Q8WYP3 895 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 MUL1Q969V5 352 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 LRRC45Q96CN5 670 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 KCTD12Q96CX2 325 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 XAGE2Q96GT9 111 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CNTNAP3BQ96NU0 1288 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CITED2Q99967 270 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CNTNAP3Q9BZ76 1288 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 ZCCHC2Q9C0B9 1178 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SYNCQ9H7C4 482 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 ERVK-5Q9HDB9 667 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 NRIP3Q9NQ35 241 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 EIF2B3Q9NR50 452 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SNX15Q9NRS6 342 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 IL19Q9UHD0 177 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SEPT9Q9UHD8 586 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CPSF3Q9UKF6 684 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 PIN4Q9Y237 131 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SSX2IPQ9Y2D8 614 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 USP15Q9Y4E8 981 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CLDN16Q9Y5I7 305 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 PIAS3Q9Y6X2 628 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.22□□□□□ -1.57
SDCBP-213ENST00000630925 PHLPP1O60346 1717 aa5.21□□□□□ -1.57
SDCBP-213ENST00000630925 NPHP4O75161 1426 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-213ENST00000630925 TRIM43BA6NCK2 446 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 SLC22A31A6NKX4 558 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 KIAA0355O15063 1070 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 CETN3O15182 167 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 ADAM20O43506 726 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 PHF2O75151 1096 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 PEX11AO75192 247 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 NDUFS2O75306 463 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 ALDH1A2O94788 518 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 IL18RAPO95256 599 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 PLGP00747 810 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-213ENST00000630925 CYP2E1P05181 493 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms