RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	FDXR	P22570	491 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	GPSM2	P81274	684 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	TP53BP2	Q13625	1128 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	MINDY4	Q4G0A6	757 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	KIAA0895L	Q68EN5	471 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	MICALCL	Q6ZW33	695 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	CATIP	Q7Z7H3	387 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	GPR149	Q86SP6	731 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	VRK3	Q8IV63	474 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	CHPF	Q8IZ52	775 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	RAB24	Q969Q5	203 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	ZSWIM1	Q9BR11	485 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	CNPPD1	Q9BV87	410 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	SLITRK6	Q9H5Y7	841 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	INTS13	Q9NVM9	706 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	ANKFY1	Q9P2R3	1169 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	ABCF2	Q9UG63	623 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	TCEAL9	Q9UHQ7	104 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	ING1	Q9UK53	422 aa	Predicted RBP	3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	STXBP5L	Q9Y2K9	1186 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	MAP3K2	Q9Y2U5	619 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	DMRT1	Q9Y5R6	373 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	EPN1	Q9Y6I3	576 aa	Predicted RBP	3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	CCDC78	A2IDD5	438 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	SUN1	O94901	812 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	ALDH2	P05091	517 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	PROZ	P22891	400 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	MPL	P40238	635 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	AGFG1	P52594	562 aa	Known RBP	3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	SEC24C	P53992	1094 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	PPP1R32	Q7Z5V6	425 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	DENND1C	Q8IV53	801 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	PDPR	Q8NCN5	879 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	TMIE	Q8NEW7	156 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	KLHDC4	Q8TBB5	520 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	BRIX1	Q8TDN6	353 aa	Known RBP	3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	TAAR9	Q96RI9	348 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	OSBPL9	Q96SU4	736 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	NELL2	Q99435	816 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	CGRRF1	Q99675	332 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	SMO	Q99835	787 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	TTPAL	Q9BTX7	342 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	TMEM60	Q9H2L4	133 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	IKZF4	Q9H2S9	585 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	SARS2	Q9NP81	518 aa	Known RBP	3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	RGS17	Q9UGC6	210 aa	Predicted RBP	3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	USP25	Q9UHP3	1055 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	NR2E3	Q9Y5X4	410 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	EID1	Q9Y6B2	187 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	AATK	Q6ZMQ8	1374 aa		3.88	□□□□□ -1.79
CNOT1-223	ENST00000628857	GOLGA6C	A6NDK9	693 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	GOLGA6B	A6NDN3	693 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	LRRC14B	A6NHZ5	514 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857		E9PLN8	166 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857		H3BUI4	141 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	TUSC2	O75896	110 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	GNAI2	P04899	355 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	GOLGA6D	P0CG33	693 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	ITGAM	P11215	1152 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	ADRA1B	P35368	520 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	COL10A1	Q03692	680 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	FPGS	Q05932	587 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	MPP3	Q13368	585 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	FGL2	Q14314	439 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	PLS1	Q14651	629 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	PPP2R5A	Q15172	486 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	PTPRR	Q15256	657 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	NBPF8	Q3BBV2	869 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	ANO6	Q4KMQ2	910 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	HECTD2	Q5U5R9	776 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	USP37	Q86T82	979 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	TPH2	Q8IWU9	490 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	GRAMD1C	Q8IYS0	662 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	MAGEB6	Q8N7X4	407 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	SLC17A8	Q8NDX2	589 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	ASB10	Q8WXI3	467 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	RUNDC1	Q96C34	613 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	RNF31	Q96EP0	1072 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	PTCD3	Q96EY7	689 aa	Known RBP	3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	SLC35A4	Q96G79	324 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	TRIB1	Q96RU8	372 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	VKORC1	Q9BQB6	163 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	HEPH	Q9BQS7	1158 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	TLR10	Q9BXR5	811 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	IMPG2	Q9BZV3	1241 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	C1orf112	Q9NSG2	853 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	KCTD5	Q9NXV2	234 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	ETAA1	Q9NY74	926 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	GOLGA6A	Q9NYA3	693 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	GABBR1	Q9UBS5	961 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	SLC45A2	Q9UMX9	530 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	MED16	Q9Y2X0	877 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	PAXBP1	Q9Y5B6	917 aa		3.87	□□□□□ -1.79
CNOT1-223	ENST00000628857	TRGV11	A0A075B6L2	103 aa		3.86	□□□□□ -1.79
CNOT1-223	ENST00000628857	CCDC151	A5D8V7	595 aa		3.86	□□□□□ -1.79
CNOT1-223	ENST00000628857	UNC119B	A6NIH7	251 aa		3.86	□□□□□ -1.79
CNOT1-223	ENST00000628857	POLRMT	O00411	1230 aa	Known RBP	3.86	□□□□□ -1.79
CNOT1-223	ENST00000628857	MPPED1	O15442	326 aa		3.86	□□□□□ -1.79
CNOT1-223	ENST00000628857	TSPAN6	O43657	245 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms