RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 ARMCX5Q6P1M9 558 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 NT5DC4Q86YG4 428 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 HSCBQ8IWL3 235 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 CCDC65Q8IXS2 484 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 SYCP3Q8IZU3 236 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 LEMD2Q8NC56 503 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 ELSPBP1Q96BH3 223 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 SHDQ96IW2 340 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 PGLYRP2Q96PD5 576 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 FAM213AQ9BRX8 229 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 PLA2G2FQ9BZM2 168 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 LRRC27Q9C0I9 530 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 TNMDQ9H2S6 317 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 CRISPLD1Q9H336 500 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 YIPF1Q9Y548 306 aa13.1□□□□□ -0.31
UBR1-212ENST00000627960 NRG2O14511 850 aaPredicted RBP13.09□□□□□ -0.31
UBR1-212ENST00000627960 CUTAO60888 179 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 MOSPD3O75425 235 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 PRPF6O94906 941 aaKnown RBP13.09□□□□□ -0.31
UBR1-212ENST00000627960 LDHAP00338 332 aaKnown RBP13.09□□□□□ -0.31
UBR1-212ENST00000627960 ZSCAN22P10073 491 aaPredicted RBP13.09□□□□□ -0.31
UBR1-212ENST00000627960 MYL4P12829 197 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 NBL1P41271 181 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 WNT7BP56706 349 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 PFKPQ01813 784 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 PRKCQQ04759 706 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 PLD1Q13393 1074 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 SNW1Q13573 536 aaKnown RBP13.09□□□□□ -0.31
UBR1-212ENST00000627960 SLC44A4Q53GD3 710 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 FOXD4L5Q5VV16 416 aaPredicted RBP13.09□□□□□ -0.31
UBR1-212ENST00000627960 TANGO2Q6ICL3 276 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 BRSK2Q8IWQ3 736 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 FOXD4L4Q8WXT5 416 aaPredicted RBP13.09□□□□□ -0.31
UBR1-212ENST00000627960 SAAL1Q96ER3 474 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 TMEM209Q96SK2 561 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 LRRC3Q9BY71 257 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 CUEDC2Q9H467 287 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 TMEM206Q9H813 350 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 ASAH2Q9NR71 780 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 KBTBD4Q9NVX7 518 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 DSEQ9UL01 958 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 SIT1Q9Y3P8 196 aa13.09□□□□□ -0.31
UBR1-212ENST00000627960 MTMR11A4FU01 709 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 CYB561D2O14569 222 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 EXTL3O43909 919 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 F13A1P00488 732 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 HSP90AA1P07900 732 aaKnown RBP13.08□□□□□ -0.32
UBR1-212ENST00000627960 FCARP24071 287 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 ALDH1A3P47895 512 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 EPHB3P54753 998 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 AMPD3Q01432 767 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 ANGPT1Q15389 498 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 MLF2Q15773 248 aaPredicted RBP13.08□□□□□ -0.32
UBR1-212ENST00000627960 FAM78AQ5JUQ0 283 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 SHC4Q6S5L8 630 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 METTL23Q86XA0 190 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 THEM5Q8N1Q8 247 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 IQUBQ8NA54 791 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 ATAD1Q8NBU5 361 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 OR10T2Q8NGX3 314 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 DHX58Q96C10 678 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 ZSWIM3Q96MP5 696 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 ASB16Q96NS5 453 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 PYM1Q9BRP8 204 aaKnown RBP13.08□□□□□ -0.32
UBR1-212ENST00000627960 CBWD1Q9BRT8 395 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 DDX23Q9BUQ8 820 aaKnown RBP13.08□□□□□ -0.32
UBR1-212ENST00000627960 ZCWPW1Q9H0M4 648 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 ZFP14Q9HCL3 533 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 RBAKQ9NYW8 714 aaPredicted RBP13.08□□□□□ -0.32
UBR1-212ENST00000627960 DLGAP2Q9P1A6 1054 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 HSFX1Q9UBD0 423 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 SLC27A5Q9Y2P5 690 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 COL4A3Q01955 1670 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 CACNA1IQ9P0X4 2223 aa13.08□□□□□ -0.32
UBR1-212ENST00000627960 KANSL1LA0AUZ9 987 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 GOLGA8JA6NMD2 632 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 KPNA7A9QM74 516 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 DCNP07585 359 aaKnown RBP13.07□□□□□ -0.32
UBR1-212ENST00000627960 GJA1P17302 382 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 PNPLA4P41247 253 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 TFAMQ00059 246 aaKnown RBP13.07□□□□□ -0.32
UBR1-212ENST00000627960 TEAD2Q15562 447 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 FOXD4L6Q3SYB3 417 aaPredicted RBP13.07□□□□□ -0.32
UBR1-212ENST00000627960 SV2CQ496J9 727 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 SLC39A12Q504Y0 691 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 WSCD1Q658N2 575 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 CNNM4Q6P4Q7 775 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 FOXD4L3Q6VB84 417 aaPredicted RBP13.07□□□□□ -0.32
UBR1-212ENST00000627960 STXBP4Q6ZWJ1 553 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 TMC8Q8IU68 726 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 GLIS3Q8NEA6 775 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 PJA1Q8NG27 643 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 SHKBP1Q8TBC3 707 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 CACTINQ8WUQ7 758 aaKnown RBP13.07□□□□□ -0.32
UBR1-212ENST00000627960 SMARCD2Q92925 531 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms