RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 NEDD9Q14511 834 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 DAB2IPQ5VWQ8 1189 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 DCAF15Q66K64 600 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 SRRM1Q8IYB3 904 aaKnown RBP20.31■□□□□ 0.84
PTBP1-220ENST00000627714 C12orf42Q96LP6 360 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 SLITRK1Q96PX8 696 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 TMEM134Q9H6X4 195 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 ACAD9Q9H845 621 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 GEMIN8Q9NWZ8 242 aaKnown RBP20.31■□□□□ 0.84
PTBP1-220ENST00000627714 PRKAG3Q9UGI9 489 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 DRG1Q9Y295 367 aaKnown RBP20.31■□□□□ 0.84
PTBP1-220ENST00000627714 A0A1B0GUA9 196 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 CFHP08603 1231 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 GLRA2P23416 452 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 ARL2P36404 184 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 SLC18A1P54219 525 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF772Q68DY9 489 aaPredicted RBP20.3■□□□□ 0.84
PTBP1-220ENST00000627714 ANKS1BQ7Z6G8 1248 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 SCYL3Q8IZE3 742 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 CYP4X1Q8N118 509 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 SLC7A3Q8WY07 619 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 C9orf72Q96LT7 481 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 MYCBPQ99417 103 aaPredicted RBP20.3■□□□□ 0.84
PTBP1-220ENST00000627714 RXFP1Q9HBX9 757 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF302Q9NR11 478 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 NUB1Q9Y5A7 615 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 RLFQ13129 1914 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 DOCK5Q9H7D0 1870 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 ADGRA2Q96PE1 1338 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 CNTNAP2Q9UHC6 1331 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 TMEM191CA6NGB0 347 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 FAM47DPA6NHR8 397 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 LRRIQ4A6NIV6 560 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 TMEM191BP0C7N4 346 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 KCNA3P22001 575 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 BNIP1Q12981 228 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 GRM1Q13255 1194 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 ACVR2BQ13705 512 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 NCOA4Q13772 614 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 MPP2Q14168 576 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF280CQ8ND82 737 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 ASAP3Q8TDY4 903 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 PWWP2AQ96N64 755 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 TEX13BQ9BXU2 312 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF518BQ9C0D4 1074 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 HAPLN2Q9GZV7 340 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 SENP1Q9P0U3 644 aa20.3■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF541Q9H0D2 1346 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 RASA4BC9J798 803 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 RASA4O43374 803 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 ATG7O95352 703 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 CETPP11597 493 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 RPS12P25398 132 aaKnown RBP20.29■□□□□ 0.84
PTBP1-220ENST00000627714 GJC1P36383 396 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 RFC5P40937 340 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF268Q14587 947 aaPredicted RBP20.29■□□□□ 0.84
PTBP1-220ENST00000627714 MORF4L2Q15014 288 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 MTFR1Q15390 333 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 RNF43Q68DV7 783 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 ALLCQ8N6M5 410 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 GDAP1Q8TB36 358 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF606Q8WXB4 792 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 MAML1Q92585 1016 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 TMEM143Q96AN5 459 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 NOD2Q9HC29 1040 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 DDX56Q9NY93 547 aaKnown RBP20.29■□□□□ 0.84
PTBP1-220ENST00000627714 KLHL14Q9P2G3 628 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 TBK1Q9UHD2 729 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 SCAF8Q9UPN6 1271 aaKnown RBP20.29■□□□□ 0.84
PTBP1-220ENST00000627714 EXOC1LA0A1B0GW35 172 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 KRT1P04264 644 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 NQO1P15559 274 aaKnown RBP20.29■□□□□ 0.84
PTBP1-220ENST00000627714 DPEP1P16444 411 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 ICAM3P32942 547 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 NCALDP61601 193 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 CCDC15Q0P6D6 951 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 UBR7Q8N806 425 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 NIFKQ9BYG3 293 aaKnown RBP20.29■□□□□ 0.84
PTBP1-220ENST00000627714 ECT2Q9H8V3 914 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 ANKFY1Q9P2R3 1169 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF148Q9UQR1 794 aa20.29■□□□□ 0.84
PTBP1-220ENST00000627714 GH1P01241 217 aa20.28■□□□□ 0.84
PTBP1-220ENST00000627714 SKIV2L2P42285 1042 aaKnown RBP20.28■□□□□ 0.84
PTBP1-220ENST00000627714 SF3A3Q12874 501 aaKnown RBP eCLIP20.28■□□□□ 0.847e-8■■■□□ 19.1
PTBP1-220ENST00000627714 PIGHQ14442 188 aaPredicted RBP20.28■□□□□ 0.84
PTBP1-220ENST00000627714 RASA2Q15283 850 aa20.28■□□□□ 0.84
PTBP1-220ENST00000627714 TBC1D1Q86TI0 1168 aaPredicted RBP20.28■□□□□ 0.84
PTBP1-220ENST00000627714 CEP57Q86XR8 500 aa20.28■□□□□ 0.84
PTBP1-220ENST00000627714 JDP2Q8WYK2 163 aa20.28■□□□□ 0.84
PTBP1-220ENST00000627714 FAM118BQ9BPY3 351 aa20.28■□□□□ 0.84
PTBP1-220ENST00000627714 TARS2Q9BW92 718 aaKnown RBP20.28■□□□□ 0.84
PTBP1-220ENST00000627714 SAYSD1Q9NPB0 183 aa20.28■□□□□ 0.84
PTBP1-220ENST00000627714 FBXO40Q9UH90 709 aa20.28■□□□□ 0.84
PTBP1-220ENST00000627714 AGAP1Q9UPQ3 857 aa20.28■□□□□ 0.84
PTBP1-220ENST00000627714 TELO2Q9Y4R8 837 aa20.28■□□□□ 0.84
PTBP1-220ENST00000627714 PRPF4O43172 522 aaKnown RBP eCLIP20.27■□□□□ 0.842e-7■■□□□ 11.5
PTBP1-220ENST00000627714 TMED2Q15363 201 aa20.27■□□□□ 0.84
PTBP1-220ENST00000627714 ZFYVE27Q5T4F4 411 aa20.27■□□□□ 0.84
PTBP1-220ENST00000627714 DNAJC24Q6P3W2 148 aa20.27■□□□□ 0.84
PTBP1-220ENST00000627714 ZPBP2Q6X784 338 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms