RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 SH3BP1Q9Y3L3 701 aa4.42□□□□□ -1.7
PTP4A1-205ENST00000626021 GMEB1Q9Y692 573 aa4.42□□□□□ -1.7
PTP4A1-205ENST00000626021 LRRC37A2A6NM11 1700 aa4.42□□□□□ -1.7
PTP4A1-205ENST00000626021 POLR2AP24928 1970 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 MYH9P35579 1960 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 USP17L5A8MUK1 530 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 C6orf229H3BNL8 230 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 FOXN3O00409 490 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 EML1O00423 815 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CLIC2O15247 247 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 TYROBPO43914 113 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ENTPD5O75356 428 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ATP5BP06576 529 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 SPATA31C1P0DKV0 1188 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 TROVE2P10155 538 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ATF2P15336 505 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 DNAJB2P25686 324 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 GCAP28676 217 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CRABP2P29373 138 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ADSSP30520 456 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 GSTT1P30711 240 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 SLC1A1P43005 524 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 TNNI2P48788 182 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 GTF2IP78347 998 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CDR2Q01850 454 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CDK18Q07002 472 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 MAP2K5Q13163 448 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 HNRNPDQ14103 355 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 MESDQ14696 234 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CCNG2Q16589 344 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 TAF1BQ53T94 588 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ACSBG2Q5FVE4 666 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 DACT2Q5SW24 774 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 FYB2Q5VWT5 728 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 PHLDB3Q6NSJ2 640 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 STXBP4Q6ZWJ1 553 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 OTUD6AQ7L8S5 288 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 PODNQ7Z5L7 613 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 LCA5Q86VQ0 697 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 C12orf56Q8IXR9 622 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 SRRM1Q8IYB3 904 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CCDC89Q8N998 374 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 PIP4K2CQ8TBX8 421 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ZNF564Q8TBZ8 553 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 MIPOL1Q8TD10 442 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 UCMAQ8WVF2 138 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CRYGNQ8WXF5 182 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ZNF75CPQ92670 426 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 PPP2R3CQ969Q6 453 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ALKBH8Q96BT7 664 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 OPTNQ96CV9 577 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 PTCD3Q96EY7 689 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 FAM81BQ96LP2 452 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CAMKK2Q96RR4 588 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 IWS1Q96ST2 819 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ZNF184Q99676 751 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 UBA5Q9GZZ9 404 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ASCC2Q9H1I8 757 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 VPS11Q9H270 941 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 JMJD4Q9H9V9 463 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 C17orf75Q9HAS0 396 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 GPAMQ9HCL2 828 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ZDHHC7Q9NXF8 308 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 STK32BQ9NY57 414 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ASIC3Q9UHC3 531 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CIDEBQ9UHD4 219 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 SAP30BPQ9UHR5 308 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 POLIQ9UNA4 740 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 MTO1Q9Y2Z2 717 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 SIP14410 1827 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 NFASCO94856 1347 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 UMODL1Q5DID0 1318 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 A0A1W2PRG0 241 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 TCRBV7S2A1N4TA0A589 114 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 BTBD19C9JJ37 291 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ZBTB5O15062 677 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 SPOPO43791 374 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 STRNO43815 780 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ATP9BO43861 1147 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 COQ9O75208 318 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 TBX10O75333 385 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CSDE1O75534 798 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 HAUS5O94927 633 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 GCNT3O95395 438 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CBX6O95503 412 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 LYNP07948 512 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 MAPTP10636 758 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CHRNB2P17787 502 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 KCNA3P22001 575 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CIITAP33076 1130 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 SHMT1P34896 483 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 MAGEA4P43358 317 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 MARCKSL1P49006 195 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 XIAPP98170 497 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 MYL7Q01449 175 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ZNF543Q08ER8 600 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 CETN1Q12798 172 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 DNAJC3Q13217 504 aa4.41□□□□□ -1.7
PTP4A1-205ENST00000626021 ITGA9Q13797 1035 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms