RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 BRD2P25440 801 aaKnown RBP20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 GBP1P32455 592 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 ACTN2P35609 894 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 ZNF394Q53GI3 561 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 FEZF2Q8TBJ5 459 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 FAXDC2Q96IV6 333 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 MAML3Q96JK9 1138 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 PDZD7Q9H5P4 517 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 CALCOCO1Q9P1Z2 691 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 PCDHGC3Q9UN70 934 aa20.96■□□□□ 0.95
PCDHB11-202ENST00000624887 TLR3O15455 904 aaKnown RBP20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 ZEB2O60315 1214 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 CSDE1O75534 798 aaKnown RBP20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 VTNP04004 478 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 CALB1P05937 261 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 HOXD8P13378 290 aaPredicted RBP20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 MAN1A1P33908 653 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 DHX9Q08211 1270 aaKnown RBP20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 DUSP28Q4G0W2 176 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 SPDYCQ5MJ68 293 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 SCARA5Q6ZMJ2 495 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 CCDC105Q8IYK2 499 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 TMEM35BQ8NCS4 154 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 MAIP1Q8WWC4 291 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 PARK7Q99497 189 aaKnown RBP20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 TXLNGYQ9BZA5 131 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 SIX4Q9UIU6 781 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 SNX24Q9Y343 169 aa20.95■□□□□ 0.94
PCDHB11-202ENST00000624887 LACTBL1A8MY62 500 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 PPFIA2O75334 1257 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 NFICP08651 508 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 SMPD1P17405 629 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 CDH5P33151 784 aaPredicted RBP20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 FAM110CQ1W6H9 321 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 ZDHHC24Q6UX98 284 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 RHOT1Q8IXI2 618 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 C1orf127Q8N9H9 656 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 SLCO2A1Q92959 643 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 GRHL1Q9NZI5 618 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 MEFVO15553 781 aaPredicted RBP20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 SHOX2O60902 331 aaPredicted RBP20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 ERLIN2O94905 339 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 ARF4P18085 180 aaPredicted RBP20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 EIF4BP23588 611 aaKnown RBP20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 HUNKP57058 714 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 KYAT1Q16773 422 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 UBLCP1Q8WVY7 318 aaPredicted RBP20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 TFAP2BQ92481 460 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 PPP1R16BQ96T49 567 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 TINF2Q9BSI4 451 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 BCO2Q9BYV7 579 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 ABHD16BQ9H3Z7 469 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 ASB7Q9H672 318 aa20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 NXF1Q9UBU9 619 aaKnown RBP20.94■□□□□ 0.94
PCDHB11-202ENST00000624887 TCRBV5S1A1TA0A578 114 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 RPS6KA5O75582 802 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 MMP3P08254 477 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 KRT19P08727 400 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 RPL21P46778 160 aaKnown RBP20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 SGO2Q562F6 1265 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 ZNF667Q5HYK9 610 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 CEP85LQ5SZL2 805 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 LEKR1Q6ZMV7 388 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 PLEKHH3Q7Z736 793 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 CPB2Q96IY4 423 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 PARP2Q9UGN5 583 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 IP6K2Q9UHH9 426 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 POLIQ9UNA4 740 aa20.93■□□□□ 0.94
PCDHB11-202ENST00000624887 TMEM191CA6NGB0 347 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 PLTPP55058 493 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 TAS2R40P59535 323 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 ACVR2BQ13705 512 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 GRIK4Q16099 956 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 MARCH8Q5T0T0 291 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 DAB2IPQ5VWQ8 1189 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 JADE1Q6IE81 842 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 KATNAL2Q8IYT4 538 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 WDTC1Q8N5D0 677 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 FBXO25Q8TCJ0 367 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 PTPN18Q99952 460 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 LCMT1Q9UIC8 334 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 ECEL1O95672 775 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 KCNJ1P48048 391 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 SKOR1P84550 965 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 WDR72Q3MJ13 1102 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 KCTD16Q68DU8 428 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 IQSEC1Q6DN90 963 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 OR6J1Q8NGC5 347 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 CXorf38Q8TB03 319 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 NLRP7Q8WX94 980 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 ATP6V1G3Q96LB4 118 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 TMBIM4Q9HC24 238 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 CEP83Q9Y592 693 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 PASKQ96RG2 1323 aa20.92■□□□□ 0.94
PCDHB11-202ENST00000624887 GOLGA6L10A6NI86 522 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 HMGB1P1B2RPK0 211 aaPredicted RBP20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 O00370 1275 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 GJB6O95452 261 aa20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 RPL7AP62424 266 aaKnown RBP20.91■□□□□ 0.94
PCDHB11-202ENST00000624887 LACTBP83111 547 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms