RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 SCARA5Q6ZMJ2 495 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 MOB2Q70IA6 237 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 TRMT10CQ7L0Y3 403 aaKnown RBP12.7□□□□□ -0.38
TP53-227ENST00000622645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.7□□□□□ -0.38
TP53-227ENST00000622645 CEP120Q8N960 986 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 GRK7Q8WTQ7 553 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 MCEEQ96PE7 176 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 TMEM109Q9BVC6 243 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 ASCC2Q9H1I8 757 aaPredicted RBP12.7□□□□□ -0.38
TP53-227ENST00000622645 NEU2Q9Y3R4 380 aa12.7□□□□□ -0.38
TP53-227ENST00000622645 TMEM191CA6NGB0 347 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 F8VP50 259 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 ABLIM1O14639 778 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 OGTO15294 1046 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 B4GALT5O43286 388 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 TMEM191BP0C7N4 346 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 MAN1A1P33908 653 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 CDR1P51861 262 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 ZNF252P-AS1Q0IIN9 211 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 SF3A3Q12874 501 aaKnown RBP eCLIP12.69□□□□□ -0.382e-8■■■□□ 17.3
TP53-227ENST00000622645 CCNG2Q16589 344 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 DUOXA2Q1HG44 320 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 Q3C1V9 767 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 C6orf89Q6UWU4 347 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 CPLX4Q7Z7G2 160 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 TMEM130Q8N3G9 435 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 EXD1Q8NHP7 514 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 TFAP2BQ92481 460 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 COPS5Q92905 334 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 ACSF2Q96CM8 615 aaPredicted RBP12.69□□□□□ -0.38
TP53-227ENST00000622645 SEC16BQ96JE7 1060 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 FGD4Q96M96 766 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 NLRP4Q96MN2 994 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 FAM129AQ9BZQ8 928 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 ANAPC5Q9UJX4 755 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 CPSF3Q9UKF6 684 aaKnown RBP12.69□□□□□ -0.38
TP53-227ENST00000622645 FOXO6A8MYZ6 492 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 CNMDO75829 334 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 OGDHQ02218 1023 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 NFX1Q12986 1120 aaKnown RBP12.69□□□□□ -0.38
TP53-227ENST00000622645 TRPC3Q13507 836 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 CDCA2Q69YH5 1023 aaPredicted RBP12.69□□□□□ -0.38
TP53-227ENST00000622645 TXNRD3NBQ6F5E7 133 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 SYDE1Q6ZW31 735 aaPredicted RBP12.69□□□□□ -0.38
TP53-227ENST00000622645 ZNF365Q70YC5 407 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 WDTC1Q8N5D0 677 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 ATXN2LQ8WWM7 1075 aaKnown RBP12.69□□□□□ -0.38
TP53-227ENST00000622645 KAT2BQ92831 832 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 CHMP6Q96FZ7 201 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 TRAIPQ9BWF2 469 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 CTNNAL1Q9UBT7 734 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 IP6K2Q9UHH9 426 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 IVNS1ABPQ9Y6Y0 642 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 PCNTO95613 3336 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 WDR90Q96KV7 1748 aa12.69□□□□□ -0.38
TP53-227ENST00000622645 CREB1P16220 341 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 ATF7P17544 494 aaPredicted RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 DRD4P21917 467 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 MCL1Q07820 350 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 MXD4Q14582 209 aaPredicted RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 SGSM1Q2NKQ1 1148 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 TNFAIP8L3Q5GJ75 292 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 CYP4A22Q5TCH4 519 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 EXOC3L1Q86VI1 746 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 ZBTB8OSQ8IWT0 167 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 FBXO16Q8IX29 292 aaPredicted RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 CENPTQ96BT3 561 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 FAM167AQ96KS9 214 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 NIF3L1Q9GZT8 377 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 ATXN2Q99700 1313 aaKnown RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 C5orf60A6NFR6 353 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 INO80B-WBP1J3KQ70 363 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 TTC4O95801 387 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 HOXC6P09630 235 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 AP3M2P53677 418 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 PDE4CQ08493 712 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 PLCB4Q15147 1175 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 CELF3Q5SZQ8 465 aaKnown RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 DCUN1D2Q6PH85 259 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 MFSD7Q6UXD7 560 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 GSTA5Q7RTV2 222 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 YTHDF3Q7Z739 585 aaKnown RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 CROCCP2Q86T23 111 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 GLIS1Q8NBF1 620 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 C3orf20Q8ND61 904 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 IPO4Q8TEX9 1081 aaKnown RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 CABS1Q96KC9 395 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 SPATA33Q96N06 139 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 PRMT1Q99873 361 aaKnown RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 INO80BQ9C086 356 aaPredicted RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 INTS9Q9NV88 658 aaKnown RBP12.68□□□□□ -0.38
TP53-227ENST00000622645 SIP14410 1827 aa12.68□□□□□ -0.38
TP53-227ENST00000622645 LOC285556D6RIA3 1793 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 IGKV6-21A0A0C4DH24 114 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 A0A0G2JLL6 359 aaPredicted RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 TCRBV5S1A1TA0A578 114 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms