RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 MAGEA1P43355 309 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 AFF1P51825 1210 aaKnown RBP15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 LILRA4P59901 499 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 INCA1Q0VD86 236 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 TUSC3Q13454 348 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 CNKSR3Q6P9H4 555 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 SCARA5Q6ZMJ2 495 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 DPH6Q7L8W6 267 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 NOP9Q86U38 636 aaKnown RBP15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 TMEM130Q8N3G9 435 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 DDX1Q92499 740 aaKnown RBP15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 MMS19Q96T76 1030 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 TSGA10Q9BZW7 698 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 GOLGA2P5Q9HBQ8 144 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 NENFQ9UMX5 172 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 SNX9Q9Y5X1 595 aa15.2■□□□□ 0.02
CLTCL1-212ENST00000622493 TDRD15B5MCY1 1934 aaKnown RBP15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 SCN5AQ14524 2016 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 KIF2AO00139 706 aaPredicted RBP15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 PPEF2O14830 753 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 KRT86O43790 486 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 CILPO75339 1184 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 PAEPP09466 180 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 GZMAP12544 262 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 GNA15P30679 374 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 KIF5AQ12840 1032 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 IKBKEQ14164 716 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 PTPN14Q15678 1187 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 ARHGAP29Q52LW3 1261 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 CCDC122Q5T0U0 273 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 NYAP1Q6ZVC0 841 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 RPUSD2Q8IZ73 545 aaKnown RBP15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 URGCPQ8TCY9 931 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 SMYD3Q9H7B4 428 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 INTUQ9ULD6 942 aa15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 BARX2Q9UMQ3 279 aaPredicted RBP15.19■□□□□ 0.02
CLTCL1-212ENST00000622493 TET1Q8NFU7 2136 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 PJA2O43164 708 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 TACC1O75410 805 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 POMCP01189 267 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 EN2P19622 333 aaPredicted RBP15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 CDH8P55286 799 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 UPP1Q16831 310 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 NOMO2Q5JPE7 1267 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 DEFB128Q7Z7B8 93 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 CRIPAKQ8N1N5 446 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 OLIG1Q8TAK6 271 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 LNX1Q8TBB1 728 aaPredicted RBP15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 SLC20A1Q8WUM9 679 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 SDCBP2Q9H190 292 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 LRFN2Q9ULH4 789 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 INPP5FQ9Y2H2 1132 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 TTC3P53804 2025 aa15.18■□□□□ 0.02
CLTCL1-212ENST00000622493 TRIM43BA6NCK2 446 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 PODXLO00592 558 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 PFKMP08237 780 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 RAG1P15918 1043 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 CHRNB2P17787 502 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 IBSPP21815 317 aaPredicted RBP15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 CLCNKBP51801 687 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 FMO1Q01740 532 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 CLLU1OSQ5K130 101 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 MFSD5Q6N075 450 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 PPP1R2P3Q6NXS1 205 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 TRIM72Q6ZMU5 477 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 LIMS2Q7Z4I7 341 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 UNC93AQ86WB7 457 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 NPAS4Q8IUM7 802 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 ABI1Q8IZP0 508 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 TMEM199Q8N511 208 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 TOP6BLQ8N6T0 577 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 ZNF606Q8WXB4 792 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 TRIM43Q96BQ3 446 aaPredicted RBP15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 DNAI2Q9GZS0 605 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 ACP6Q9NPH0 428 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 LZTFL1Q9NQ48 299 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 KIAA1257Q9ULG3 409 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 UQCRHLA0A096LP55 91 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 ABHD14A-ACY1A0A1B0GW23 586 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 SPTLC1O15269 473 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 HUS1O60921 280 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 UQCRHP07919 91 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 MMEP08473 750 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 RAP1GAPP47736 663 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 SOWAHAQ2M3V2 549 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 TCTN1Q2MV58 587 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 ZNF394Q53GI3 561 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 APPL2Q8NEU8 664 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 WHAMMQ8TF30 809 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 TMEM176AQ96HP8 235 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 NT5C1AQ9BXI3 368 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 ISCUQ9H1K1 167 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 PRDM5Q9NQX1 630 aaPredicted RBP15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 SEPT11Q9NVA2 429 aaKnown RBP15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 MYO1AQ9UBC5 1043 aa15.17■□□□□ 0.02
CLTCL1-212ENST00000622493 THAP12O43422 761 aa15.16■□□□□ 0.02
CLTCL1-212ENST00000622493 MED7O43513 233 aa15.16■□□□□ 0.02
CLTCL1-212ENST00000622493 EFCAB14O75071 495 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms