RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 CEP57Q86XR8 500 aa18.77■□□□□ 0.6
SLC6A6-209ENST00000622176 MICAL1Q8TDZ2 1067 aa18.77■□□□□ 0.6
SLC6A6-209ENST00000622176 MYLIPQ8WY64 445 aa18.77■□□□□ 0.6
SLC6A6-209ENST00000622176 RIN2Q8WYP3 895 aaPredicted RBP18.77■□□□□ 0.6
SLC6A6-209ENST00000622176 PIK3R5Q8WYR1 880 aa18.77■□□□□ 0.6
SLC6A6-209ENST00000622176 GAS2L1Q99501 681 aaPredicted RBP18.77■□□□□ 0.6
SLC6A6-209ENST00000622176 MRPL17Q9NRX2 175 aaKnown RBP18.77■□□□□ 0.6
SLC6A6-209ENST00000622176 LIMA1Q9UHB6 759 aaKnown RBP18.77■□□□□ 0.6
SLC6A6-209ENST00000622176 SNX9Q9Y5X1 595 aa18.77■□□□□ 0.6
SLC6A6-209ENST00000622176 MTCH2Q9Y6C9 303 aa18.77■□□□□ 0.6
SLC6A6-209ENST00000622176 PRRC2BQ5JSZ5 2229 aaKnown RBP18.77■□□□□ 0.59
SLC6A6-209ENST00000622176 C2orf71A6NGG8 1288 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 LRRC10BA6NIK2 292 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 CETN1Q12798 172 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 KRT31Q15323 416 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 WDR72Q3MJ13 1102 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 VWA3BQ502W6 1294 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 MIIPQ5JXC2 388 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 VARS2Q5ST30 1063 aaKnown RBP18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 PLPP4Q5VZY2 271 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 PDXDC1Q6P996 788 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 ANKS3Q6ZW76 656 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 DPH6Q7L8W6 267 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 LUZP1Q86V48 1076 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 TOP6BLQ8N6T0 577 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 LNX1Q8TBB1 728 aaPredicted RBP18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 AUTS2Q8WXX7 1259 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 NDST4Q9H3R1 872 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 RXFP1Q9HBX9 757 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 DSEQ9UL01 958 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 PCDHGC5Q9Y5F6 944 aa18.76■□□□□ 0.59
SLC6A6-209ENST00000622176 VWA8A3KMH1 1905 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 HIDE1A8MVS5 230 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 LRRN2O75325 713 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 OAZ2O95190 189 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 FAM163BP0C2L3 166 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 PRKCSHP14314 528 aaPredicted RBP18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 CDK11BP21127 795 aaKnown RBP18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 ZNF667Q5HYK9 610 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 WSCD1Q658N2 575 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 PDCL2Q8N4E4 241 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 ANKRD20A12PQ8NF67 263 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 SPATA18Q8TC71 538 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 FAXDC2Q96IV6 333 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 PI4K2AQ9BTU6 479 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 IMPG2Q9BZV3 1241 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 TAB2Q9NYJ8 693 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 L1RE1Q9UN81 338 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 TIMM13Q9Y5L4 95 aaPredicted RBP18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 BACE2Q9Y5Z0 518 aa18.75■□□□□ 0.59
SLC6A6-209ENST00000622176 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 GTPBP10A4D1E9 387 aaKnown RBP18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 C2CD2LO14523 706 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 TBC1D4O60343 1298 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 HUS1O60921 280 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 CSPG5O95196 566 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 ATP1A3P13637 1013 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 FOSL2P15408 326 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 TNNC1P63316 161 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 NOP14P78316 857 aaKnown RBP18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 CREMQ03060 361 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 YWHAHQ04917 246 aaPredicted RBP18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 SOWAHAQ2M3V2 549 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 PRSS55Q6UWB4 352 aaPredicted RBP18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 APTXQ7Z2E3 356 aaKnown RBP18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 TMEM86AQ8N2M4 240 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 CCDC150Q8NCX0 1101 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 LMO3Q8TAP4 145 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 NSUN3Q9H649 340 aaKnown RBP18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 APOBEC3GQ9HC16 384 aaKnown RBP18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 FNIP2Q9P278 1114 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 MTRRQ9UBK8 725 aa18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 NXF1Q9UBU9 619 aaKnown RBP18.74■□□□□ 0.59
SLC6A6-209ENST00000622176 H7C4K7 107 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 TACC1O75410 805 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 CNPP09543 421 aaKnown RBP18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 P4HA1P13674 534 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 IGFBP4P22692 258 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 COPB1P53618 953 aaKnown RBP18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 PSMD5Q16401 504 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 WDR44Q5JSH3 913 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 OVOS1Q6IE37 1185 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 SPOPLQ6IQ16 392 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 METTL23Q86XA0 190 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 EHBP1Q8NDI1 1231 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 MAFAQ8NHW3 353 aaPredicted RBP18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 ELMO3Q96BJ8 720 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 MMS19Q96T76 1030 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 ANP32EQ9BTT0 268 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 EMILIN2Q9BXX0 1053 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 OXCT2Q9BYC2 517 aaPredicted RBP18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 POLIQ9UNA4 740 aa18.73■□□□□ 0.59
SLC6A6-209ENST00000622176 GOLGA6L19H0YKK7 550 aa18.72■□□□□ 0.59
SLC6A6-209ENST00000622176 GABRDO14764 452 aa18.72■□□□□ 0.59
SLC6A6-209ENST00000622176 TEX28O15482 410 aa18.72■□□□□ 0.59
SLC6A6-209ENST00000622176 TPM2P07951 284 aa18.72■□□□□ 0.59
SLC6A6-209ENST00000622176 ASPAP45381 313 aa18.72■□□□□ 0.59
SLC6A6-209ENST00000622176 TPM4P67936 248 aa18.72■□□□□ 0.59
SLC6A6-209ENST00000622176 ZNF280DQ6N043 979 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms