RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 IQANK1A0A1B0GTG1 560 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 SLC15A5A6NIM6 579 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 SPDYE5A6NIY4 337 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 M0QYT0 321 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 NFKBIEO00221 500 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 MEIS2O14770 477 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 RPLP2P05387 115 aaKnown RBP9.72□□□□□ -0.85
GGA3-223ENST00000621870 RBP3P10745 1247 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 ACAT1P24752 427 aaKnown RBP9.72□□□□□ -0.85
GGA3-223ENST00000621870 CHRNA3P32297 505 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 CUL1Q13616 776 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 CENPPQ6IPU0 288 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 KCNK18Q7Z418 384 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 SRRM1Q8IYB3 904 aaKnown RBP9.72□□□□□ -0.85
GGA3-223ENST00000621870 GSPT2Q8IYD1 628 aaKnown RBP9.72□□□□□ -0.85
GGA3-223ENST00000621870 ZBED8Q8IZ13 594 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 WDR24Q96S15 920 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 ADAM33Q9BZ11 813 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 CYP4F11Q9HBI6 524 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 METTL5Q9NRN9 209 aaKnown RBP9.72□□□□□ -0.85
GGA3-223ENST00000621870 BAG5Q9UL15 447 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 HPSEQ9Y251 543 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 KIF1AQ12756 1690 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 PRR23AA6NEV1 266 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 BTBD19C9JJ37 291 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 TXNDC9O14530 226 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 CST8O60676 142 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 ATP9AO75110 1047 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 EIF4BP23588 611 aaKnown RBP9.72□□□□□ -0.85
GGA3-223ENST00000621870 PIGHQ14442 188 aaPredicted RBP9.72□□□□□ -0.85
GGA3-223ENST00000621870 NFE2Q16621 373 aaPredicted RBP9.72□□□□□ -0.85
GGA3-223ENST00000621870 THEMIS2Q5TEJ8 643 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 IZUMO3Q5VZ72 239 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 TTI2Q6NXR4 508 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 RAD9BQ6WBX8 426 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 ADGRF2Q8IZF7 708 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 CCNYL1Q8N7R7 359 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 CEP120Q8N960 986 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 UPF1Q92900 1129 aaKnown RBP eCLIP9.72□□□□□ -0.853e-6■■□□□ 13.9
GGA3-223ENST00000621870 OSBPL8Q9BZF1 889 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 SEMA6BQ9H3T3 888 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 BAIAP2L1Q9UHR4 511 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 PCDHB12Q9Y5F1 795 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 ALG6Q9Y672 507 aa9.72□□□□□ -0.85
GGA3-223ENST00000621870 MYO5BQ9ULV0 1848 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 A0A087X0T9 212 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 EEF2KO00418 725 aaKnown RBP9.71□□□□□ -0.85
GGA3-223ENST00000621870 FAM228BP0C875 321 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 WEE1P30291 646 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 CCT5P48643 541 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 DRP2Q13474 957 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 CASP8Q14790 479 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 NAB2Q15742 525 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 PCSK7Q16549 785 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 SH2D4BQ5SQS7 431 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 OVOS1Q6IE37 1185 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 ZNF280DQ6N043 979 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 FRA10AC1Q70Z53 315 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 ATPAF2Q8N5M1 289 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 MORC4Q8TE76 937 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 RAPGEF5Q92565 580 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 N4BP2L2Q92802 583 aaPredicted RBP9.71□□□□□ -0.85
GGA3-223ENST00000621870 SLC5A5Q92911 643 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 ACSF2Q96CM8 615 aaPredicted RBP9.71□□□□□ -0.85
GGA3-223ENST00000621870 PNMA5Q96PV4 448 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 ERGIC2Q96RQ1 377 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 NUF2Q9BZD4 464 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 EPC1Q9H2F5 836 aa9.71□□□□□ -0.85
GGA3-223ENST00000621870 OLA1Q9NTK5 396 aaKnown RBP9.71□□□□□ -0.85
GGA3-223ENST00000621870 C3orf70A6NLC5 250 aaPredicted RBP9.71□□□□□ -0.86
GGA3-223ENST00000621870 ACKR2O00590 384 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 MSCO60682 206 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 DNAJC6O75061 913 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 ITGB5P18084 799 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 COMTP21964 271 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 SLC1A1P43005 524 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 NNTQ13423 1086 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 SLC27A1Q6PCB7 646 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 EMBQ6PCB8 327 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 NIPA1Q7RTP0 329 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 TC2NQ8N9U0 490 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 SPATA4Q8NEY3 305 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 SCG3Q8WXD2 468 aaKnown RBP9.71□□□□□ -0.86
GGA3-223ENST00000621870 RMDN2Q96LZ7 410 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 OLFML3Q9NRN5 406 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 CISHQ9NSE2 258 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 HACD3Q9P035 362 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 DBR1Q9UK59 544 aaKnown RBP9.71□□□□□ -0.86
GGA3-223ENST00000621870 TFR2Q9UP52 801 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 HES2Q9Y543 173 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 RASA4BC9J798 803 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 COPEO14579 308 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 RASA4O43374 803 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 NPM3O75607 178 aaKnown RBP9.71□□□□□ -0.86
GGA3-223ENST00000621870 PLEKP08567 350 aaPredicted RBP9.71□□□□□ -0.86
GGA3-223ENST00000621870 IGFBP4P22692 258 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 ETFBP38117 255 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 KCNJ1P48048 391 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 OCRLQ01968 901 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 YWHAHQ04917 246 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms