RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 SWSAP1Q6NVH7 229 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 MIS18BP1Q6P0N0 1132 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 TLDC1Q6P9B6 456 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 MFSD7Q6UXD7 560 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 TRIM72Q6ZMU5 477 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 SPOCD1Q6ZMY3 1216 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 CATSPERGQ6ZRH7 1159 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 RGS9BPQ6ZS82 235 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 CYP4V2Q6ZWL3 525 aaPredicted RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 TRPM8Q7Z2W7 1104 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 PHLDB2Q86SQ0 1253 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 NLRX1Q86UT6 975 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 TRABD2AQ86V40 505 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 TAX1BP1Q86VP1 789 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 CCDC25Q86WR0 208 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 RHOT1Q8IXI2 618 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 TMEM130Q8N3G9 435 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 RIBC1Q8N443 379 aaPredicted RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 ZNF276Q8N554 614 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 ZCCHC9Q8N567 271 aaKnown RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 WDTC1Q8N5D0 677 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 ALLCQ8N6M5 410 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 ARFGAP1Q8N6T3 406 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 NIPA2Q8N8Q9 360 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 ATL2Q8NHH9 583 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 CXorf38Q8TB03 319 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 SLC35B2Q8TB61 432 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 MAGEC3Q8TD91 643 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 GRK7Q8WTQ7 553 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 MZB1Q8WU39 189 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 TFAP2BQ92481 460 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 PRCCQ92733 491 aaPredicted RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 ARHGEF2Q92974 986 aaKnown RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 ATP6V0A1Q93050 837 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 NKD2Q969F2 451 aaPredicted RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 TMEM143Q96AN5 459 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 CEP170P1Q96L14 293 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 FAM81BQ96LP2 452 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 RMDN2Q96LZ7 410 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 PRMT1Q99873 361 aaKnown RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 FAM118BQ9BPY3 351 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 FAM213AQ9BRX8 229 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 TARS2Q9BW92 718 aaKnown RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 TRAIPQ9BWF2 469 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 NIFKQ9BYG3 293 aaKnown RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 FOXP3Q9BZS1 431 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 PHACTR1Q9C0D0 580 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 XYLT2Q9H1B5 865 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 R3HDMLQ9H3Y0 253 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 TMEM134Q9H6X4 195 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 ACAD9Q9H845 621 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 YY1AP1Q9H869 796 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 KIAA1586Q9HCI6 787 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 INTS9Q9NV88 658 aaKnown RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 FGFR1OP2Q9NVK5 253 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 DNAJC17Q9NVM6 304 aaKnown RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 KLHL11Q9NVR0 708 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 STK32BQ9NY57 414 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 KANSL3Q9P2N6 904 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 TJP2Q9UDY2 1190 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 RGS17Q9UGC6 210 aaPredicted RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 ASIC3Q9UHC3 531 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 SEPT9Q9UHD8 586 aaPredicted RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 CYTH4Q9UIA0 394 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 HACL1Q9UJ83 578 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 MCM8Q9UJA3 840 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 AGO2Q9UKV8 859 aaKnown RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 DNPEPQ9ULA0 475 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 GRID1Q9ULK0 1009 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 PCDHGC3Q9UN70 934 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 FARP1Q9Y4F1 1045 aaPredicted RBP3.43□□□□□ -1.86
U1.39-201ENST00000621562 AFG3L2Q9Y4W6 797 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 ACTL7BQ9Y614 415 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 DNAH12Q6ZR08 3092 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 PLXNA4Q9HCM2 1894 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 BPTFQ12830 3046 aa3.43□□□□□ -1.86
U1.39-201ENST00000621562 SRCAPQ6ZRS2 3230 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 SCN8AQ9UQD0 1980 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 IGKV6-21A0A0C4DH24 114 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 SOWAHBA6NEL2 793 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 F8VP50 259 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 PI4K2BG5E9Z4 385 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 H0YCG3 227 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 FZD9O00144 591 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 CHUKO15111 745 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 MAGEB2O15479 319 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 PRPF4O43172 522 aaKnown RBP eCLIP3.42□□□□□ -1.86
U1.39-201ENST00000621562 THAP12O43422 761 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 TYROBPO43914 113 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 ADCY3O60266 1144 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 PEX10O60683 326 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 DKC1O60832 514 aaKnown RBP eCLIP3.42□□□□□ -1.86
U1.39-201ENST00000621562 CDH16O75309 829 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 MAFO75444 373 aaPredicted RBP3.42□□□□□ -1.86
U1.39-201ENST00000621562 LGR5O75473 907 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 BANF1O75531 89 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 CNMDO75829 334 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 STAM2O75886 525 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 TMEM63AO94886 807 aa3.42□□□□□ -1.86
U1.39-201ENST00000621562 FARP2O94887 1054 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms