RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 UBA7P41226 1012 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 RESTQ13127 1097 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 CUL4AQ13619 759 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 SLC44A4Q53GD3 710 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 STXBP5Q5T5C0 1151 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 TPRG1Q6ZUI0 275 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 TMC8Q8IU68 726 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 ADSSL1Q8N142 457 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 BEST2Q8NFU1 509 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 KCNN1Q92952 543 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 CALML4Q96GE6 196 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 CLIC6Q96NY7 704 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 FGFBP2Q9BYJ0 223 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 DNAJC25Q9H1X3 360 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 PARVGQ9HBI0 331 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 AVENQ9NQS1 362 aaPredicted RBP12.44□□□□□ -0.42
CPNE3-210ENST00000621245 HEBP1Q9NRV9 189 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 KCND2Q9NZV8 630 aa12.44□□□□□ -0.42
CPNE3-210ENST00000621245 FBXO2Q9UK22 296 aaPredicted RBP12.44□□□□□ -0.42
CPNE3-210ENST00000621245 GREB1Q4ZG55 1949 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 A0A087X0B3 334 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 A0A0B4J269 797 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 KANSL1LA0AUZ9 987 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 H7C4K7 107 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 OGTO15294 1046 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 TRAK2O60296 914 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 ECI2O75521 394 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 ADRB2P07550 413 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 MYL4P12829 197 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 PTPN2P17706 415 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 ELF1P32519 619 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 LONP1P36776 959 aaKnown RBP12.43□□□□□ -0.42
CPNE3-210ENST00000621245 VIPR2P41587 438 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 ACOT2P49753 483 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 PPP2R3AQ06190 1150 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 KCNA1Q09470 495 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 UBXN2BQ14CS0 331 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 TEAD2Q15562 447 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 TPGS2Q68CL5 300 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 VITQ6UXI7 678 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 DYMQ7RTS9 669 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 METTL3Q86U44 580 aaKnown RBP12.43□□□□□ -0.42
CPNE3-210ENST00000621245 MAP4K3Q8IVH8 894 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 C1orf210Q8IVY1 113 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 EFCAB13Q8IY85 973 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 ZNF687Q8N1G0 1237 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 OR10T2Q8NGX3 314 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 SHKBP1Q8TBC3 707 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 LARP4BQ92615 738 aaKnown RBP12.43□□□□□ -0.42
CPNE3-210ENST00000621245 MSTO1Q9BUK6 570 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 LRRC3Q9BY71 257 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 ZNF334Q9HCZ1 680 aaPredicted RBP12.43□□□□□ -0.42
CPNE3-210ENST00000621245 LTB4R2Q9NPC1 389 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.43□□□□□ -0.42
CPNE3-210ENST00000621245 LARSQ9P2J5 1176 aaKnown RBP12.43□□□□□ -0.42
CPNE3-210ENST00000621245 AFF4Q9UHB7 1163 aaKnown RBP12.43□□□□□ -0.42
CPNE3-210ENST00000621245 CPSF3Q9UKF6 684 aaKnown RBP12.43□□□□□ -0.42
CPNE3-210ENST00000621245 UBQLN1Q9UMX0 589 aaKnown RBP12.43□□□□□ -0.42
CPNE3-210ENST00000621245 PTPRDP23468 1912 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 ANAPC1Q9H1A4 1944 aa12.43□□□□□ -0.42
CPNE3-210ENST00000621245 MYO16Q9Y6X6 1858 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 MYMKA6NI61 221 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 OAZ2O95190 189 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 KRT18P05783 430 aaKnown RBP12.42□□□□□ -0.42
CPNE3-210ENST00000621245 CASP5P51878 434 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 EPHA5P54756 1037 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 GTF2BQ00403 316 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
CPNE3-210ENST00000621245 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
CPNE3-210ENST00000621245 DUSP4Q13115 394 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 FZD5Q13467 585 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 SPATA1Q5VX52 437 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 C9orf57Q5W0N0 161 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 TSSK4Q6SA08 328 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
CPNE3-210ENST00000621245 PDZD4Q76G19 769 aaPredicted RBP12.42□□□□□ -0.42
CPNE3-210ENST00000621245 RTL10Q7L3V2 364 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 SFR1Q86XK3 245 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 KCTD17Q8N5Z5 321 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 APPL2Q8NEU8 664 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 ELSPBP1Q96BH3 223 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 SENP8Q96LD8 212 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 ASB16Q96NS5 453 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 ARID3AQ99856 593 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 RPF1Q9H9Y2 349 aaKnown RBP12.42□□□□□ -0.42
CPNE3-210ENST00000621245 PLEKHA5Q9HAU0 1116 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 GDE1Q9NZC3 331 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 SLC27A5Q9Y2P5 690 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.42□□□□□ -0.42
CPNE3-210ENST00000621245 ATG2BQ96BY7 2078 aa12.42□□□□□ -0.42
CPNE3-210ENST00000621245 KIAA1549LQ6ZVL6 1849 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 HELZP42694 1942 aaKnown RBP12.41□□□□□ -0.42
CPNE3-210ENST00000621245 MTMR11A4FU01 709 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 FAM170BA6NMN3 283 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 SLC26A4O43511 780 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 TBCAO75347 108 aaKnown RBP12.41□□□□□ -0.42
CPNE3-210ENST00000621245 CYP3A5P20815 502 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 ADSSP30520 456 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 MCM2P49736 904 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms