RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 NUMBLQ9Y6R0 609 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 A6NHS1 94 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 ATP9AO75110 1047 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 ARP10275 920 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 KITP10721 976 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 GAP43P17677 238 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 IVDP26440 423 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 SOX10P56693 466 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 EFTUD2Q15029 972 aaKnown RBP eCLIP7.34□□□□□ -1.23
NEDD9-216ENST00000620854 TNFAIP8L3Q5GJ75 292 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 RNF43Q68DV7 783 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 OTOAQ7RTW8 1153 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 LRRC6Q86X45 466 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 SLC25A41Q8N5S1 370 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 PDCD7Q8N8D1 485 aaKnown RBP7.34□□□□□ -1.23
NEDD9-216ENST00000620854 SMC1BQ8NDV3 1235 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 RFWD2Q8NHY2 731 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 LMO3Q8TAP4 145 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 WDR18Q9BV38 432 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 TMEM109Q9BVC6 243 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 TRIM4Q9C037 500 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 TMEM39BQ9GZU3 492 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 OLFML3Q9NRN5 406 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 HNRNPDLO14979 420 aaKnown RBP7.34□□□□□ -1.23
NEDD9-216ENST00000620854 CCNB1P14635 433 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 PECAM1P16284 738 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-216ENST00000620854 GNAZP19086 355 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 MARK3P27448 753 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 SSTR1P30872 391 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 NSFP46459 744 aaKnown RBP7.34□□□□□ -1.23
NEDD9-216ENST00000620854 GAD2Q05329 585 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 OTOP1Q7RTM1 612 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 TTC7BQ86TV6 843 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 TAS1R2Q8TE23 839 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 FAM20AQ96MK3 541 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 HSD17B14Q9BPX1 270 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 ZNF577Q9BSK1 485 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 DEFB129Q9H1M3 183 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 LRRC19Q9H756 370 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 HSPBP1Q9NZL4 362 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 WHRNQ9P202 907 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 ANKFY1Q9P2R3 1169 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 VAV3Q9UKW4 847 aa7.34□□□□□ -1.23
NEDD9-216ENST00000620854 SCAF8Q9UPN6 1271 aaKnown RBP7.34□□□□□ -1.23
NEDD9-216ENST00000620854 LRRIQ4A6NIV6 560 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 ATP6V1C1P21283 382 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 SERPINB4P48594 390 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 LIG4P49917 911 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 MKRN3Q13064 507 aaKnown RBP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 PDIA2Q13087 525 aaKnown RBP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 PADI6Q6TGC4 694 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 AGGF1Q8N302 714 aaeCLIP7.33□□□□□ -1.246e-8■□□□□ 10.6
NEDD9-216ENST00000620854 C2orf69Q8N8R5 385 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 HIPK4Q8NE63 616 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 TTC17Q96AE7 1141 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 BEGAINQ9BUH8 593 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 DCLK3Q9C098 648 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 ARL8BQ9NVJ2 186 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 RAB20Q9NX57 234 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 NYAP2Q9P242 653 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 MARCOQ9UEW3 520 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 SCOCQ9UIL1 159 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 FEM1BQ9UK73 627 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 LRRC42Q9Y546 428 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 FRMPD4Q14CM0 1322 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 KIF3CO14782 793 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 ASMTLO95671 621 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 ETS2P15036 469 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 KCNA3P22001 575 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 SP100P23497 879 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 SERPINB3P29508 390 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 ARSEP51690 589 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 YWHAGP61981 247 aaKnown RBP eCLIP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 GABPAQ06546 454 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 THOC5Q13769 683 aaKnown RBP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 MAPK6Q16659 721 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 ANKS1BQ7Z6G8 1248 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 DEPTORQ8TB45 409 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 WDR60Q8WVS4 1066 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 ZNF75CPQ92670 426 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 CD101Q93033 1021 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 MIPEPQ99797 713 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 LRMDAQ9H2I8 198 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 DNPEPQ9ULA0 475 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 MAD1L1Q9Y6D9 718 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 WASF2Q9Y6W5 498 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 DDTLA6NHG4 134 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-216ENST00000620854 SPDYE2BA6NHP3 402 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 FSCN2O14926 492 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 DCTN3O75935 186 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 NDUFB10O96000 172 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 CFHP08603 1231 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 SPDYE6P0CI01 402 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 TCF4P15884 667 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 SAT1P21673 171 aa7.33□□□□□ -1.24
NEDD9-216ENST00000620854 KDSRQ06136 332 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms