RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CXCL14O95715 111 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 URODP06132 367 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 TUBBP07437 444 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 SKILP12757 684 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 KCNA5P22460 613 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 CCNE1P24864 410 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 HOXA9P31269 272 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 BRCC3P46736 316 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 OR1G1P47890 313 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 NDUFV1P49821 464 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 CLCNKBP51801 687 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 MCCD1P59942 119 aaPredicted RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 DLG4P78352 724 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 RBM10P98175 930 aaKnown RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 DSG1Q02413 1049 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 HYAL1Q12794 435 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 CBX2Q14781 532 aaPredicted RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 TMEM132DQ14C87 1099 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 CCDC85BQ15834 202 aaPredicted RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 SNRNP35Q16560 246 aaKnown RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 UPP1Q16831 310 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 SPATA1Q5VX52 437 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 CEP135Q66GS9 1140 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 KLHL10Q6JEL2 608 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 KIAA1841Q6NSI8 718 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 C11orf57Q6ZUT1 292 aaPredicted RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 ANKS3Q6ZW76 656 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 ADGRD2Q7Z7M1 963 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 IRF2BP1Q8IU81 584 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 VPS52Q8N1B4 723 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 C1orf127Q8N9H9 656 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 MLKLQ8NB16 471 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 XXYLT1Q8NBI6 393 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 VN1R2Q8NFZ6 395 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 GOLGA5Q8TBA6 731 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 FEZF2Q8TBJ5 459 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 SPATA18Q8TC71 538 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 HASPINQ8TF76 798 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 NOC3LQ8WTT2 800 aaKnown RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 NELFBQ8WX92 580 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 SUSD6Q92537 303 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 CCDC47Q96A33 483 aaKnown RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 KIF12Q96FN5 646 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 PRRX2Q99811 253 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 HERC2P3Q9BVR0 1158 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 PHF7Q9BWX1 381 aaPredicted RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 COL25A1Q9BXS0 654 aaPredicted RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 ZBP1Q9H171 429 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 ADAM7Q9H2U9 754 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 ASB7Q9H672 318 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 INTS13Q9NVM9 706 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 RMND1Q9NWS8 449 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 ZDHHC7Q9NXF8 308 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 CLDND1Q9NY35 253 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 RBAKQ9NYW8 714 aaPredicted RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 HSFX1Q9UBD0 423 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 USP34Q70CQ2 3546 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 FRYLO94915 3013 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 ZNF233A6NK53 670 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 HIDE1A8MVS5 230 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 PI4K2BG5E9Z4 385 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 PODXLO00592 558 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 PIRO00625 290 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 ADAM12O43184 909 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 EXOC3O60645 756 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 GPR37L1O60883 481 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 MICAL2O94851 1124 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 IL18RAPO95256 599 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 VNN1O95497 513 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 HNRNPA1P09651 372 aaKnown RBP eCLIP5.65□□□□□ -1.5
SHMT1-211ENST00000618902 FAM163BP0C2L3 166 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 TRIM49P0CI25 452 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 TRIM49CP0CI26 452 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 NR2F2P24468 414 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 LRPAP1P30533 357 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 LTBRP36941 435 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 NRIP1P48552 1158 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 GLUD2P49448 558 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 AARSP49588 968 aaKnown RBP eCLIP5.65□□□□□ -1.5
SHMT1-211ENST00000618902 CLDN10P78369 228 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 TFAMQ00059 246 aaKnown RBP5.65□□□□□ -1.5
SHMT1-211ENST00000618902 PPP2R3AQ06190 1150 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 ENPEPQ07075 957 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 PPP3CAQ08209 521 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 ADAM9Q13443 819 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 MYBPC2Q14324 1141 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 PSMD6Q15008 389 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 SURF1Q15526 300 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 EDRF1Q3B7T1 1238 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 RTP2Q5QGT7 225 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 ATAT1Q5SQI0 421 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 KIAA0319Q5VV43 1072 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 C9orf57Q5W0N0 161 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 ANKRD54Q6NXT1 300 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 FUT10Q6P4F1 479 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 RSPO2Q6UXX9 243 aaPredicted RBP5.65□□□□□ -1.5
SHMT1-211ENST00000618902 NYAP1Q6ZVC0 841 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 UBALD2Q8IYN6 164 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 GJD3Q8N144 294 aa5.65□□□□□ -1.5
SHMT1-211ENST00000618902 SPC24Q8NBT2 197 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 496.4 ms