RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 ORC1Q13415 861 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 NOMO2Q5JPE7 1267 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 FAM117BQ6P1L5 589 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 TMEM270Q6UE05 265 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 C16orf59Q7L2K0 433 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 OTOP2Q7RTS6 562 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 SLC47A2Q86VL8 602 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 FAM71AQ8IYT1 594 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 SYN2Q92777 582 aaPredicted RBP17.41■□□□□ 0.38
SNAP47-213ENST00000617596 NUCKS1Q9H1E3 243 aaKnown RBP17.41■□□□□ 0.38
SNAP47-213ENST00000617596 ZMYND8Q9ULU4 1186 aaPredicted RBP17.41■□□□□ 0.38
SNAP47-213ENST00000617596 MYO6Q9UM54 1294 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 PCDHB4Q9Y5E5 795 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 SCN1AP35498 2009 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 TBXAS1P24557 533 aaPredicted RBP17.4■□□□□ 0.38
SNAP47-213ENST00000617596 GRIK3Q13003 919 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 GPS2Q13227 327 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 TMTC1Q8IUR5 882 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 ABI1Q8IZP0 508 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 HASPINQ8TF76 798 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 ZNF592Q92610 1267 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 TAF4BQ92750 862 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 TSPAN18Q96SJ8 248 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 ELAC1Q9H777 363 aaKnown RBP17.4■□□□□ 0.38
SNAP47-213ENST00000617596 CISHQ9NSE2 258 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 TBC1D13Q9NVG8 400 aa17.4■□□□□ 0.38
SNAP47-213ENST00000617596 PDCD11Q14690 1871 aaKnown RBP17.39■□□□□ 0.38
SNAP47-213ENST00000617596 PODXLO00592 558 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 SERPING1P05155 500 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 LRPAP1P30533 357 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 EPHB4P54760 987 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 DEFB103AP81534 67 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 ZNF571Q7Z3V5 609 aaPredicted RBP17.39■□□□□ 0.37
SNAP47-213ENST00000617596 LRRC52Q8N7C0 313 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 SLC20A1Q8WUM9 679 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 CASD1Q96PB1 797 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 VRTNQ9H8Y1 702 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 PSD3Q9NYI0 1048 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 HMGXB4Q9UGU5 601 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 NRDCO43847 1150 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 FERP16591 822 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 LILRA4P59901 499 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 TNNC1P63316 161 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 RNASELQ05823 741 aaKnown RBP17.39■□□□□ 0.37
SNAP47-213ENST00000617596 ENOSF1Q7L5Y1 443 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 UBR7Q8N806 425 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 ACRBPQ8NEB7 543 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 BCO2Q9BYV7 579 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 DNAJB4Q9UDY4 337 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 DAAM1Q9Y4D1 1078 aa17.39■□□□□ 0.37
SNAP47-213ENST00000617596 KPNA7A9QM74 516 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 I3L4J1 428 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 ITGB1P05556 798 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 SSTR3P32745 418 aaPredicted RBP17.38■□□□□ 0.37
SNAP47-213ENST00000617596 TAF6P49848 677 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 GFPT1Q06210 699 aaPredicted RBP17.38■□□□□ 0.37
SNAP47-213ENST00000617596 TUSC3Q13454 348 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 UPP1Q16831 310 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 DNAAF5Q86Y56 855 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 RPUSD2Q8IZ73 545 aaKnown RBP17.38■□□□□ 0.37
SNAP47-213ENST00000617596 URGCPQ8TCY9 931 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 CCDC42Q96M95 316 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 MRPL45Q9BRJ2 306 aaKnown RBP17.38■□□□□ 0.37
SNAP47-213ENST00000617596 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.38■□□□□ 0.37
SNAP47-213ENST00000617596 DEF6Q9H4E7 631 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 IL23AQ9NPF7 189 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 TTC3P53804 2025 aa17.38■□□□□ 0.37
SNAP47-213ENST00000617596 A0A0U1RQJ8 604 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 USP27XA6NNY8 438 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 TBKBP1A7MCY6 615 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 VGLL3A8MV65 326 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 INPPL1O15357 1258 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 HCRTO43612 131 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 STAU1O95793 577 aaKnown RBP17.37■□□□□ 0.37
SNAP47-213ENST00000617596 PLA2G4AP47712 749 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 CLCN6P51797 869 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 CDK17Q00537 523 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 CYP27A1Q02318 531 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 NPAS4Q8IUM7 802 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 RBBP8NLQ8NC74 664 aaPredicted RBP17.37■□□□□ 0.37
SNAP47-213ENST00000617596 ATRIPQ8WXE1 791 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 DPF3Q92784 378 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 ZNF560Q96MR9 790 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 TWNKQ96RR1 684 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 TRMT1Q9NXH9 659 aaKnown RBP17.37■□□□□ 0.37
SNAP47-213ENST00000617596 CWC15Q9P013 229 aaKnown RBP17.37■□□□□ 0.37
SNAP47-213ENST00000617596 ADAMTS1Q9UHI8 967 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 ABHD14A-ACY1A0A1B0GW23 586 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 ERICH4A6NGS2 130 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 B3GAT3O94766 335 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 NDUFA10O95299 355 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 PBX3P40426 434 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 PRKCIP41743 596 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 KIF11P52732 1056 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 WDR5P61964 334 aaKnown RBP17.37■□□□□ 0.37
SNAP47-213ENST00000617596 SOWAHAQ2M3V2 549 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 TMCO3Q6UWJ1 677 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 ZNF365Q70YC5 407 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 NOP9Q86U38 636 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms