RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 IL31Q6EBC2 164 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 CD300LGQ6UXG3 332 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 CEP68Q76N32 757 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 C3orf58Q8NDZ4 430 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 DEPTORQ8TB45 409 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 BSNDQ8WZ55 320 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 AK8Q96MA6 479 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 DRC1Q96MC2 740 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 ASB16Q96NS5 453 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 PPP1R10Q96QC0 940 aaKnown RBP9.32□□□□□ -0.92
GPC6-202ENST00000617456 KIFC3Q9BVG8 833 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 CCDC113Q9H0I3 377 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 SLITRK6Q9H5Y7 841 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 AVENQ9NQS1 362 aaPredicted RBP9.32□□□□□ -0.92
GPC6-202ENST00000617456 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.32□□□□□ -0.92
GPC6-202ENST00000617456 RBM12Q9NTZ6 932 aaKnown RBP9.32□□□□□ -0.92
GPC6-202ENST00000617456 SMC3Q9UQE7 1217 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.32□□□□□ -0.92
GPC6-202ENST00000617456 ZFHX4Q86UP3 3567 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 RALGAPA1Q6GYQ0 2036 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 FAM208BQ5VWN6 2430 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 K7ERI5 159 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 ZRANB2O95218 330 aaKnown RBP eCLIP9.31□□□□□ -0.92
GPC6-202ENST00000617456 IPO7O95373 1038 aaKnown RBP9.31□□□□□ -0.92
GPC6-202ENST00000617456 CHRNB1P11230 501 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 PSMC3P17980 439 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 ABCD1P33897 745 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 SOX9P48436 509 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 KPNA1P52294 538 aaPredicted RBP9.31□□□□□ -0.92
GPC6-202ENST00000617456 GTF2A1P52655 376 aaPredicted RBP9.31□□□□□ -0.92
GPC6-202ENST00000617456 FOSBP53539 338 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 OSTNP61366 133 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 ATP2C1P98194 919 aaPredicted RBP9.31□□□□□ -0.92
GPC6-202ENST00000617456 TWF1Q12792 350 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 GAS6Q14393 721 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 ZRSR2Q15696 482 aaKnown RBP9.31□□□□□ -0.92
GPC6-202ENST00000617456 CCDC6Q16204 474 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 UPP1Q16831 310 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 AASDHQ4L235 1098 aaPredicted RBP9.31□□□□□ -0.92
GPC6-202ENST00000617456 IQCEQ6IPM2 695 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 DNAJC14Q6Y2X3 702 aaPredicted RBP9.31□□□□□ -0.92
GPC6-202ENST00000617456 Q6ZS52 159 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 ZSCAN30Q86W11 494 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 GPIHBP1Q8IV16 184 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 MAP4K3Q8IVH8 894 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 YAF2Q8IY57 180 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 CACTIN-AS1Q8N1I8 211 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 ELMOD1Q8N336 334 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 LSM14AQ8ND56 463 aaKnown RBP9.31□□□□□ -0.92
GPC6-202ENST00000617456 ZNF461Q8TAF7 563 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 TTC8Q8TAM2 541 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 ZSCAN18Q8TBC5 510 aaPredicted RBP9.31□□□□□ -0.92
GPC6-202ENST00000617456 CSGALNACT1Q8TDX6 532 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 SMARCD2Q92925 531 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 TMX3Q96JJ7 454 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 UROC1Q96N76 676 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 IER2Q9BTL4 223 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 BHMT2Q9H2M3 363 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 POLD4Q9HCU8 107 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 ANGPTL2Q9UKU9 493 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 KIAA1024Q9UPX6 916 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 TNFSF13BQ9Y275 285 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 INSL5Q9Y5Q6 135 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 BAHCC1Q9P281 2608 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 NCANO14594 1321 aa9.31□□□□□ -0.92
GPC6-202ENST00000617456 SLC38A8A6NNN8 435 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 HEPACAM2A8MVW5 462 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 H0YCG3 227 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 PODXLO00592 558 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 AXIN1O15169 862 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 MOSPD3O75425 235 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 ABLIM3O94929 683 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 ATF2P15336 505 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 HOXC13P31276 330 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 GSCP56915 257 aaPredicted RBP9.3□□□□□ -0.92
GPC6-202ENST00000617456 SOX4Q06945 474 aaPredicted RBP9.3□□□□□ -0.92
GPC6-202ENST00000617456 LRRC32Q14392 662 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 SF3A2Q15428 464 aaKnown RBP9.3□□□□□ -0.92
GPC6-202ENST00000617456 TEAD2Q15562 447 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 CTXN3Q4LDR2 81 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 XKR4Q5GH76 650 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 C1QTNF12Q5T7M4 302 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 N4BP2L1Q5TBK1 243 aaPredicted RBP9.3□□□□□ -0.92
GPC6-202ENST00000617456 NT5DC1Q5TFE4 455 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 ATF7IP2Q5U623 682 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 SLC8B1Q6J4K2 584 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 MAMSTRQ6ZN01 415 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 BRAPQ7Z569 592 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 LONP2Q86WA8 852 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 SPEM1Q8N4L4 309 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 FAM160A2Q8N612 972 aaPredicted RBP9.3□□□□□ -0.92
GPC6-202ENST00000617456 SNX29Q8TEQ0 813 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 DEPDC1BQ8WUY9 529 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 SPIRE2Q8WWL2 714 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 ZNF512Q96ME7 567 aaPredicted RBP9.3□□□□□ -0.92
GPC6-202ENST00000617456 TRPV5Q9NQA5 729 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 ASAH2Q9NR71 780 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 TOPORSQ9NS56 1045 aaPredicted RBP9.3□□□□□ -0.92
GPC6-202ENST00000617456 DDX19AQ9NUU7 478 aaKnown RBP9.3□□□□□ -0.92
GPC6-202ENST00000617456 C2orf42Q9NWW7 574 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms