RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 GEMIN4P57678 1058 aaKnown RBP16.45■□□□□ 0.22
SYNRG-223ENST00000616179 EFTUD2Q15029 972 aaKnown RBP eCLIP16.45■□□□□ 0.226e-7■■■■■ 29.5
SYNRG-223ENST00000616179 CHI3L2Q15782 390 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 SBK1Q52WX2 424 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 COBLL1Q53SF7 1204 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 KLC3Q6P597 504 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 TMPRSS6Q8IU80 811 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 ATP11CQ8NB49 1132 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 PPP4R1Q8TF05 950 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 NRG4Q8WWG1 115 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 PAFAH2Q99487 392 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 MIPEPQ99797 713 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 MAK16Q9BXY0 300 aaKnown RBP16.45■□□□□ 0.22
SYNRG-223ENST00000616179 WWP1Q9H0M0 922 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 ARHGEF38Q9NXL2 777 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 CTDP1Q9Y5B0 961 aaPredicted RBP16.45■□□□□ 0.22
SYNRG-223ENST00000616179 PCDHA3Q9Y5H8 950 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 E2F8A0AVK6 867 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 TLR3O15455 904 aaKnown RBP16.45■□□□□ 0.22
SYNRG-223ENST00000616179 ASMTLO95671 621 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 OAS1P00973 400 aaKnown RBP16.45■□□□□ 0.22
SYNRG-223ENST00000616179 PTK7Q13308 1070 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 CCDC92Q53HC0 331 aaPredicted RBP16.45■□□□□ 0.22
SYNRG-223ENST00000616179 C11orf63Q6NUN7 778 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 MIER3Q7Z3K6 550 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 OR6Y1Q8NGX8 325 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 SEC14L1Q92503 715 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 CRAMP1Q96RY5 1269 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 TIPINQ9BVW5 301 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 KLHL4Q9C0H6 718 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 C1orf112Q9NSG2 853 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 DTNAQ9Y4J8 743 aa16.45■□□□□ 0.22
SYNRG-223ENST00000616179 AKAP12Q02952 1782 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 PEX1O43933 1283 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
SYNRG-223ENST00000616179 CDK16Q00536 496 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 C16orf72Q14CZ0 275 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 DNAL1Q4LDG9 190 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 FAM102BQ5T8I3 360 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 ATG16L1Q676U5 607 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 C10orf82Q8WW14 230 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 TMEM121Q9BTD3 319 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 TXNDC16Q9P2K2 825 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 TMCO1Q9UM00 188 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 DISP2A7MBM2 1401 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 TCN1P20061 433 aaPredicted RBP16.44■□□□□ 0.22
SYNRG-223ENST00000616179 ARSHQ5FYA8 562 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 MFSD4BQ5TF39 518 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 NEDD1Q8NHV4 660 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 PPWD1Q96BP3 646 aaKnown RBP16.44■□□□□ 0.22
SYNRG-223ENST00000616179 PRR11Q96HE9 360 aaPredicted RBP16.44■□□□□ 0.22
SYNRG-223ENST00000616179 THEGQ9P2T0 379 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 DOLKQ9UPQ8 538 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 TNS3Q68CZ2 1445 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 GPR75-ASB3A0A0A6YYF3 556 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 EYA4O95677 639 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 AKR1B1P15121 316 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 DLG4P78352 724 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 TRMT5Q32P41 509 aaKnown RBP16.44■□□□□ 0.22
SYNRG-223ENST00000616179 ZNF394Q53GI3 561 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 WDR75Q8IWA0 830 aaKnown RBP16.44■□□□□ 0.22
SYNRG-223ENST00000616179 RHOT1Q8IXI2 618 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 NR1H4Q96RI1 486 aaPredicted RBP16.44■□□□□ 0.22
SYNRG-223ENST00000616179 AGPAT3Q9NRZ7 376 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 ASB3Q9Y575 518 aa16.44■□□□□ 0.22
SYNRG-223ENST00000616179 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.44■□□□□ 0.22
SYNRG-223ENST00000616179 RIMBP3CA6NJZ7 1639 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 RIMBP3BA6NNM3 1639 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 RIMBP3Q9UFD9 1639 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 ZBTB5O15062 677 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 ITGA2BP08514 1039 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 T-ENOLP0DO92 83 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 PPP2R5DQ14738 602 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 PDK3Q15120 406 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 C1orf228Q6PIY5 440 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 USP37Q86T82 979 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 NOP9Q86U38 636 aaKnown RBP16.43■□□□□ 0.22
SYNRG-223ENST00000616179 RBM15BQ8NDT2 890 aaKnown RBP16.43■□□□□ 0.22
SYNRG-223ENST00000616179 DCUN1D5Q9BTE7 237 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 HOXA7P31268 230 aaPredicted RBP16.43■□□□□ 0.22
SYNRG-223ENST00000616179 KRT81Q14533 505 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 GSTA3Q16772 222 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 QRICH1Q2TAL8 776 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 RINT1Q6NUQ1 792 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 ZCCHC23Q6ZST2 131 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 TXNRD3Q86VQ6 643 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 JMJD4Q9H9V9 463 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 UVRAGQ9P2Y5 699 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 TSC22D4Q9Y3Q8 395 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 NCANO14594 1321 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 ERVV-1B6SEH8 477 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 F5H423 210 aaPredicted RBP16.43■□□□□ 0.22
SYNRG-223ENST00000616179 ORC2Q13416 577 aaPredicted RBP16.43■□□□□ 0.22
SYNRG-223ENST00000616179 MYBPC3Q14896 1274 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 MAP3K21Q5TCX8 1036 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 C16orf87Q6PH81 154 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 SLF2Q8IX21 1173 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 ZDHHC14Q8IZN3 488 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 CALN1Q9BXU9 219 aa16.43■□□□□ 0.22
SYNRG-223ENST00000616179 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms