RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 GMEB1Q9Y692 573 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 ASAP2O43150 1006 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 SMIM10L2AP0DMW4 78 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 SMIM10L2BP0DMW5 78 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 MYBP10242 640 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 HSPA9P38646 679 aaKnown RBP13.9□□□□□ -0.18
FOXN3-219ENST00000615335 CARSP49589 748 aaKnown RBP13.9□□□□□ -0.18
FOXN3-219ENST00000615335 NKX3-2P78367 333 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 DEUP1Q05D60 604 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 C10orf76Q5T2E6 689 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 LHX8Q68G74 356 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 EIF1ADQ8N9N8 165 aaKnown RBP13.9□□□□□ -0.18
FOXN3-219ENST00000615335 PCSK9Q8NBP7 692 aaKnown RBP13.9□□□□□ -0.18
FOXN3-219ENST00000615335 KLHDC9Q8NEP7 349 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 IFT81Q8WYA0 676 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 TAF4BQ92750 862 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 IFT74Q96LB3 600 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.9□□□□□ -0.18
FOXN3-219ENST00000615335 UNC93B1Q9H1C4 597 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 C17orf75Q9HAS0 396 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.9□□□□□ -0.187e-7■□□□□ 10.3
FOXN3-219ENST00000615335 ATXN10Q9UBB4 475 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 NFU1Q9UMS0 254 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 PACSIN2Q9UNF0 486 aaPredicted RBP13.9□□□□□ -0.18
FOXN3-219ENST00000615335 PLAAQ9Y263 795 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 LRRC42Q9Y546 428 aa13.9□□□□□ -0.18
FOXN3-219ENST00000615335 COL1A2P08123 1366 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 NRCAMQ92823 1304 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 BTNL10A8MVZ5 291 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 K7ENM7 598 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 ACTN1P12814 892 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 ZC2HC1CQ53FD0 456 aaPredicted RBP13.89□□□□□ -0.19
FOXN3-219ENST00000615335 ZNF720Q7Z2F6 126 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 FRMD5Q7Z6J6 570 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 C7orf31Q8N865 590 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 FIZ1Q96SL8 496 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 KRT12Q99456 494 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 DMAP1Q9NPF5 467 aaPredicted RBP13.89□□□□□ -0.19
FOXN3-219ENST00000615335 ARMCX3Q9UH62 379 aaPredicted RBP13.89□□□□□ -0.19
FOXN3-219ENST00000615335 TRAF3IP3Q9Y228 551 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 RRN3P2A6NIE6 340 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 HAS3O00219 553 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 SLC16A4O15374 487 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 MAGEB2O15479 319 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 GAS2O43903 313 aaKnown RBP13.89□□□□□ -0.19
FOXN3-219ENST00000615335 C22orf31O95567 290 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 AFPP02771 609 aaKnown RBP13.89□□□□□ -0.19
FOXN3-219ENST00000615335 NPTX2P47972 431 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 MTFR1Q15390 333 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 KNOP1Q1ED39 458 aaKnown RBP13.89□□□□□ -0.19
FOXN3-219ENST00000615335 IER5Q5VY09 327 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 ANO7Q6IWH7 933 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 PRPF31Q8WWY3 499 aaKnown RBP13.89□□□□□ -0.19
FOXN3-219ENST00000615335 BSNDQ8WZ55 320 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 TRIM7Q9C029 511 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 KMT5AQ9NQR1 393 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 PCMTD2Q9NV79 361 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 TMCO1Q9UM00 188 aa13.89□□□□□ -0.19
FOXN3-219ENST00000615335 BZW2Q9Y6E2 419 aaKnown RBP13.89□□□□□ -0.19
FOXN3-219ENST00000615335 IGKV6-21A0A0C4DH24 114 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 ESYT3A0FGR9 886 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 CALUO43852 315 aaPredicted RBP13.88□□□□□ -0.19
FOXN3-219ENST00000615335 GSTA2P09210 222 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 DESP17661 470 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 SLC9A1P19634 815 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 CST5P28325 142 aaPredicted RBP13.88□□□□□ -0.19
FOXN3-219ENST00000615335 ARL2P36404 184 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 RTP1P59025 263 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 RNASE9P60153 205 aaKnown RBP13.88□□□□□ -0.19
FOXN3-219ENST00000615335 TNNC1P63316 161 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 PTK2Q05397 1052 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 VTI1AQ96AJ9 217 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 KIFC3Q9BVG8 833 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 RNF208Q9H0X6 261 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 SUCLA2Q9P2R7 463 aaPredicted RBP13.88□□□□□ -0.19
FOXN3-219ENST00000615335 PCDHB13Q9Y5F0 798 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 ZSCAN5CA6NGD5 496 aaPredicted RBP13.88□□□□□ -0.19
FOXN3-219ENST00000615335 FAM153BP0C7A2 387 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 GLRA2P23416 452 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 TMOD1P28289 359 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 CLCN3P51790 818 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 RPS6KA1Q15418 735 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 FAM153CQ494X1 144 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 ODF2Q5BJF6 829 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 MARCH8Q5T0T0 291 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 CCSAPQ6IQ19 270 aaPredicted RBP13.88□□□□□ -0.19
FOXN3-219ENST00000615335 EPM2AIP1Q7L775 607 aaPredicted RBP13.88□□□□□ -0.19
FOXN3-219ENST00000615335 ZNF571Q7Z3V5 609 aaPredicted RBP13.88□□□□□ -0.19
FOXN3-219ENST00000615335 HAUS6Q7Z4H7 955 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 IRF2BP2Q7Z5L9 587 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 ERICH1Q86X53 443 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 RHPN2Q8IUC4 686 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 KSR1Q8IVT5 923 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 USP38Q8NB14 1042 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 ASAP3Q8TDY4 903 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 CASKIN2Q8WXE0 1202 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 PSPC1Q8WXF1 523 aaKnown RBP13.88□□□□□ -0.19
FOXN3-219ENST00000615335 FAM153AQ9UHL3 310 aa13.88□□□□□ -0.19
FOXN3-219ENST00000615335 A0A1B0GVG6 124 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms