RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 UTP11Q9Y3A2 253 aaKnown RBP20.37■□□□□ 0.85
MMP28-204ENST00000615136 A6NJR5 290 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 ZNF699Q32M78 642 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 C17orf99Q6UX52 265 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 SH2D3CQ8N5H7 860 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 C1orf127Q8N9H9 656 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 ZNF606Q8WXB4 792 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 USP6NLQ92738 828 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 SCLT1Q96NL6 688 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 C11orf70Q9BRQ4 267 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 CXCL16Q9H2A7 254 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 ERVK-5Q9HDB9 667 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 UVRAGQ9P2Y5 699 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 HMGB1P1B2RPK0 211 aaPredicted RBP20.36■□□□□ 0.85
MMP28-204ENST00000615136 H0YGN5 161 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 ZEB2O60315 1214 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 KRT19P08727 400 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 MCF2P10911 925 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 HSPA6P17066 643 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 RAP1GAPP47736 663 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 GNGT1P63211 74 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 MTMR3Q13615 1198 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 SLC10A6Q3KNW5 377 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 TLK2Q86UE8 772 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 UBL4BQ8N7F7 174 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 CXorf38Q8TB03 319 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 ATP6V1G3Q96LB4 118 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 RAB17Q9H0T7 212 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.36■□□□□ 0.85
MMP28-204ENST00000615136 GINS2Q9Y248 185 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 NFS1Q9Y697 457 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 MANSC4A6NHS7 340 aaPredicted RBP20.36■□□□□ 0.85
MMP28-204ENST00000615136 TNNC2P02585 160 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 SMIM10L2AP0DMW4 78 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 SMIM10L2BP0DMW5 78 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 BRD2P25440 801 aaKnown RBP20.36■□□□□ 0.85
MMP28-204ENST00000615136 CTGFP29279 349 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 NSFP46459 744 aaKnown RBP20.36■□□□□ 0.85
MMP28-204ENST00000615136 DAB2IPQ5VWQ8 1189 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 IFNL1Q8IU54 200 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 ANKRD36BP1Q96IX9 119 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 SLC5A4Q9NY91 659 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 NXF1Q9UBU9 619 aaKnown RBP20.36■□□□□ 0.85
MMP28-204ENST00000615136 ANAPC7Q9UJX3 599 aa20.36■□□□□ 0.85
MMP28-204ENST00000615136 FAM187AA6NFU0 413 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 GJB6O95452 261 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 F2P00734 622 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 PTP4A2Q12974 167 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 DHX34Q14147 1143 aaKnown RBP20.35■□□□□ 0.85
MMP28-204ENST00000615136 KCTD16Q68DU8 428 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 RGMBQ6NW40 437 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 RUFY4Q6ZNE9 571 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 TMC3Q7Z5M5 1100 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 ZDHHC14Q8IZN3 488 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 TFAP2BQ92481 460 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 ADAMTS10Q9H324 1103 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 TMBIM4Q9HC24 238 aa20.35■□□□□ 0.85
MMP28-204ENST00000615136 IL18RAPO95256 599 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 PYGMP11217 842 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 BEX3Q00994 111 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 DR1Q01658 176 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 CEP85LQ5SZL2 805 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 MMS22LQ6ZRQ5 1243 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 ZIC5Q96T25 663 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 TRIM51Q9BSJ1 452 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 SDCBP2Q9H190 292 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 WNT8AQ9H1J5 351 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 RRP15Q9Y3B9 282 aaKnown RBP20.34■□□□□ 0.85
MMP28-204ENST00000615136 A0A1B0GUA9 196 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 SPOPO43791 374 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 ITGB3P05106 788 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 FLT3P36888 993 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 CDH8P55286 799 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 DUPD1Q68J44 220 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 AVENQ9NQS1 362 aaPredicted RBP20.34■□□□□ 0.85
MMP28-204ENST00000615136 GJD2Q9UKL4 321 aa20.34■□□□□ 0.85
MMP28-204ENST00000615136 PHF2O75151 1096 aa20.33■□□□□ 0.85
MMP28-204ENST00000615136 NR1D1P20393 614 aa20.33■□□□□ 0.85
MMP28-204ENST00000615136 CTNNA1P35221 906 aaKnown RBP20.33■□□□□ 0.85
MMP28-204ENST00000615136 ZNF200P98182 395 aaPredicted RBP20.33■□□□□ 0.85
MMP28-204ENST00000615136 ORC1Q13415 861 aa20.33■□□□□ 0.85
MMP28-204ENST00000615136 DNAJC21Q5F1R6 531 aaKnown RBP20.33■□□□□ 0.85
MMP28-204ENST00000615136 SPDYCQ5MJ68 293 aa20.33■□□□□ 0.85
MMP28-204ENST00000615136 ADAM22Q9P0K1 906 aa20.33■□□□□ 0.85
MMP28-204ENST00000615136 TRIP12Q14669 1992 aaPredicted RBP20.33■□□□□ 0.84
MMP28-204ENST00000615136 TCRBV7S2A1N4TA0A589 114 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 GPR32O75388 356 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 ERLIN2O94905 339 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 HOXA11P31270 313 aaPredicted RBP20.32■□□□□ 0.84
MMP28-204ENST00000615136 LLGL1Q15334 1064 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 WDR72Q3MJ13 1102 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 ERP44Q9BS26 406 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 TXLNGYQ9BZA5 131 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 DPH5Q9H2P9 285 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 RSPH14Q9UHP6 348 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 LCMT1Q9UIC8 334 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 TRIP11Q15643 1979 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 GOLGA6L10A6NI86 522 aa20.32■□□□□ 0.84
MMP28-204ENST00000615136 FAM155AB1AL88 458 aaPredicted RBP20.32■□□□□ 0.84
MMP28-204ENST00000615136 SLC10A3P09131 477 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms