RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SLITRK6Q9H5Y7 841 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 NR2E3Q9Y5X4 410 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 MAST3O60307 1309 aa6.46□□□□□ -1.38
SCAMP1-205ENST00000614488 PRSS29PA6NIE9 313 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 ZNF785A8K8V0 405 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 H3BML4 177 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 AP1G1O43747 822 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 ALDH2P05091 517 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 LPOP22079 712 aaPredicted RBP6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 ANXA11P50995 505 aaKnown RBP6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 SEC24CP53992 1094 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 RPS7P62081 194 aaKnown RBP6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 TCF15Q12870 199 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 ZNF267Q14586 743 aaPredicted RBP6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 NFE2Q16621 373 aaPredicted RBP6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 CCDC157Q569K6 752 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 TAPT1Q6NXT6 567 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 TPH2Q8IWU9 490 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 LNX2Q8N448 690 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 BRIX1Q8TDN6 353 aaKnown RBP6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 CAVIN3Q969G5 261 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 MTFMTQ96DP5 389 aaKnown RBP6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 CGRRF1Q99675 332 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 SMOQ99835 787 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 SIK2Q9H0K1 926 aa6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 EPN1Q9Y6I3 576 aaPredicted RBP6.45□□□□□ -1.38
SCAMP1-205ENST00000614488 TRGV11A0A075B6L2 103 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 ESRRBO95718 433 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 PSMC1P62191 440 aaKnown RBP6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 MPP3Q13368 585 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 PLS1Q14651 629 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 EMC10Q5UCC4 262 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 B3GNT9Q6UX72 402 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 TMPRSS9Q7Z410 1059 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 PPP1R3BQ86XI6 285 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 DENND1CQ8IV53 801 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 RAVER1Q8IY67 606 aaKnown RBP6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 SLC9A6Q92581 669 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 DDX17Q92841 729 aaKnown RBP6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 SLC35A4Q96G79 324 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 CNPPD1Q9BV87 410 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 SLAMF7Q9NQ25 335 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 INTS13Q9NVM9 706 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 VSX1Q9NZR4 365 aaPredicted RBP6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 DMTF1Q9Y222 760 aa6.44□□□□□ -1.38
SCAMP1-205ENST00000614488 H3BUI4 141 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 SUN1O94901 812 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 GNAI2P04899 355 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 ZNF135P52742 658 aaPredicted RBP6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 COL10A1Q03692 680 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 DYRK1AQ13627 763 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 FAM102BQ5T8I3 360 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 EPM2AIP1Q7L775 607 aaPredicted RBP6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 KLHDC4Q8TBB5 520 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 SLC35G2Q8TBE7 412 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 SSH3Q8TE77 659 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 JDP2Q8WYK2 163 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 TNPO1Q92973 898 aaKnown RBP6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 TMEM125Q96AQ2 219 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 PTCD3Q96EY7 689 aaKnown RBP6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 Q96MF0 132 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 TAAR9Q96RI9 348 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 TRIB1Q96RU8 372 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 TINAGL1Q9GZM7 467 aaPredicted RBP6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 CASS4Q9NQ75 786 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 KCTD5Q9NXV2 234 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 ETAA1Q9NY74 926 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 EID1Q9Y6B2 187 aa6.43□□□□□ -1.38
SCAMP1-205ENST00000614488 POLRMTO00411 1230 aaKnown RBP6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 SCGB1D2O95969 90 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 SRGNP10124 158 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 FOXI1Q12951 378 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 HABP2Q14520 560 aaPredicted RBP6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 HLXQ14774 488 aaPredicted RBP6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 PPP2R5AQ15172 486 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 NXNQ6DKJ4 435 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 Q6ZNX1 250 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 PPP1R32Q7Z5V6 425 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 CHPFQ8IZ52 775 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 ADGRG5Q8IZF4 528 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 SH2D3CQ8N5H7 860 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 CAMKK1Q8N5S9 505 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 POC1BQ8TC44 478 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 LRGUKQ96M69 825 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 ANLNQ9NQW6 1124 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 GABBR1Q9UBS5 961 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 PCDHA1Q9Y5I3 950 aa6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.42□□□□□ -1.38
SCAMP1-205ENST00000614488 TOR1BO14657 336 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 SOAT2O75908 522 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 LMNAP02545 664 aaKnown RBP6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 AHSGP02765 367 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 TYRP1P17643 537 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 MPLP40238 635 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 INHBEP58166 350 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 MC2RQ01718 297 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 FPGSQ05932 587 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 PREPLQ4J6C6 727 aaPredicted RBP6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 CRB2Q5IJ48 1285 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms