RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 KRT9P35527 623 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 CLK1P49759 484 aaKnown RBP12.78□□□□□ -0.36
SRRT-215ENST00000614484 SLMAPQ14BN4 828 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 TTMPQ5BVD1 217 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 ZCCHC8Q6NZY4 707 aaKnown RBP12.78□□□□□ -0.36
SRRT-215ENST00000614484 KIAA0319LQ8IZA0 1049 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 PCSK9Q8NBP7 692 aaKnown RBP12.78□□□□□ -0.36
SRRT-215ENST00000614484 DEPTORQ8TB45 409 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 SCFD1Q8WVM8 642 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 TMEM40Q8WWA1 233 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 ZBTB45Q96K62 511 aaPredicted RBP12.78□□□□□ -0.36
SRRT-215ENST00000614484 PYM1Q9BRP8 204 aaKnown RBP12.78□□□□□ -0.36
SRRT-215ENST00000614484 MUC3BQ9H195 1237 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 EPN3Q9H201 632 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 HAUS4Q9H6D7 363 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 MMRN2Q9H8L6 949 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 IGSF5Q9NSI5 407 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 IP6K2Q9UHH9 426 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 CARD8Q9Y2G2 431 aa12.78□□□□□ -0.36
SRRT-215ENST00000614484 N4BP3O15049 544 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 MAFO75444 373 aaPredicted RBP12.77□□□□□ -0.36
SRRT-215ENST00000614484 LYPLA2O95372 231 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 LINGO3P0C6S8 592 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 IDO1P14902 403 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 FUT4P22083 530 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 FECHP22830 423 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 CCL23P55773 120 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 CCDC38Q502W7 563 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 HAUS6Q7Z4H7 955 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 TMEM130Q8N3G9 435 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 NELFBQ8WX92 580 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 PSPC1Q8WXF1 523 aaKnown RBP12.77□□□□□ -0.36
SRRT-215ENST00000614484 ELMO3Q96BJ8 720 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 FAM167AQ96KS9 214 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 PREBQ9HCU5 417 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 LARSQ9P2J5 1176 aaKnown RBP12.77□□□□□ -0.36
SRRT-215ENST00000614484 PRUNE2Q8WUY3 3088 aa12.77□□□□□ -0.36
SRRT-215ENST00000614484 NDUFA10O95299 355 aa12.77□□□□□ -0.37
SRRT-215ENST00000614484 CYP2J2P51589 502 aa12.77□□□□□ -0.37
SRRT-215ENST00000614484 PABPC1LQ4VXU2 614 aaKnown RBP12.77□□□□□ -0.37
SRRT-215ENST00000614484 NT5DC1Q5TFE4 455 aa12.77□□□□□ -0.37
SRRT-215ENST00000614484 PAPD7Q5XG87 772 aaKnown RBP12.77□□□□□ -0.37
SRRT-215ENST00000614484 LZICQ8WZA0 190 aa12.77□□□□□ -0.37
SRRT-215ENST00000614484 CHP1Q99653 195 aa12.77□□□□□ -0.37
SRRT-215ENST00000614484 PPP1R3GB7ZBB8 358 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 ZNF185O15231 689 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 AKR1B10O60218 316 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 B3GALNT1O75752 331 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 PLS3P13797 630 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 HOXD13P35453 343 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 GUCY1A3Q02108 690 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 NNTQ13423 1086 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 TRIM60Q495X7 471 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 ALS2CLQ60I27 953 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 ANKRD40Q6AI12 368 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 RSPH3Q86UC2 560 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 RETREG2Q8NC44 543 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 SCLYQ96I15 445 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 IFT74Q96LB3 600 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 KAT6AQ92794 2004 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 NRCAMQ92823 1304 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 PENKP01210 267 aaPredicted RBP12.76□□□□□ -0.37
SRRT-215ENST00000614484 EPB41P11171 864 aaKnown RBP12.76□□□□□ -0.37
SRRT-215ENST00000614484 DNM2P50570 870 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 PPP1R15BQ5SWA1 713 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 ZNF658Q5TYW1 1059 aaPredicted RBP12.76□□□□□ -0.37
SRRT-215ENST00000614484 NR1H4Q96RI1 486 aaPredicted RBP12.76□□□□□ -0.37
SRRT-215ENST00000614484 TARS2Q9BW92 718 aaKnown RBP12.76□□□□□ -0.37
SRRT-215ENST00000614484 VPS16Q9H269 839 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 SEMA6BQ9H3T3 888 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 GTF2IRD1Q9UHL9 959 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 TFR2Q9UP52 801 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 TTLL3Q9Y4R7 772 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 ITIH6Q6UXX5 1313 aa12.76□□□□□ -0.37
SRRT-215ENST00000614484 PABPN1LA6NDY0 278 aaKnown RBP12.75□□□□□ -0.37
SRRT-215ENST00000614484 RNF225M0QZC1 329 aaPredicted RBP12.75□□□□□ -0.37
SRRT-215ENST00000614484 PDE2AO00408 941 aaPredicted RBP12.75□□□□□ -0.37
SRRT-215ENST00000614484 MSCO60682 206 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 RHOBTB3O94955 611 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 TROVE2P10155 538 aaKnown RBP eCLIP12.75□□□□□ -0.37
SRRT-215ENST00000614484 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 CNNM4Q6P4Q7 775 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 CYB5D1Q6P9G0 228 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 BPHLQ86WA6 291 aaPredicted RBP12.75□□□□□ -0.37
SRRT-215ENST00000614484 MCPH1Q8NEM0 835 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 SPATA20Q8TB22 786 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 RNPC3Q96LT9 517 aaKnown RBP12.75□□□□□ -0.37
SRRT-215ENST00000614484 CCT8L2Q96SF2 557 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 FIZ1Q96SL8 496 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 UPF3AQ9H1J1 476 aaKnown RBP12.75□□□□□ -0.37
SRRT-215ENST00000614484 MRPL46Q9H2W6 279 aaKnown RBP12.75□□□□□ -0.37
SRRT-215ENST00000614484 PDLIM7Q9NR12 457 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 ATXN10Q9UBB4 475 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 Q9Y3F1 56 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 PCDHA2Q9Y5H9 948 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 SLC30A1Q9Y6M5 507 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 TMEM247A6NEH6 219 aa12.75□□□□□ -0.37
SRRT-215ENST00000614484 GHRP10912 638 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms