RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 OR4Q2P0C623 313 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 GPC5P78333 572 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 AMPD3Q01432 767 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 PFKPQ01813 784 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 FOXD4L5Q5VV16 416 aaPredicted RBP24.58■■□□□ 1.53
FAM228B-208ENST00000613899 ARMCX5Q6P1M9 558 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 BRSK2Q8IWQ3 736 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 EFCAB13Q8IY85 973 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 KCNG4Q8TDN1 519 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 FOXD4L4Q8WXT5 416 aaPredicted RBP24.58■■□□□ 1.53
FAM228B-208ENST00000613899 SHDQ96IW2 340 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 PGLYRP2Q96PD5 576 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 FAM213AQ9BRX8 229 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 ASAH2Q9NR71 780 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 FAM86C1Q9NVL1 165 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 KBTBD4Q9NVX7 518 aa24.58■■□□□ 1.53
FAM228B-208ENST00000613899 IQUBQ8NA54 791 aa24.57■■□□□ 1.52
FAM228B-208ENST00000613899 DHX58Q96C10 678 aa24.57■■□□□ 1.52
FAM228B-208ENST00000613899 SAAL1Q96ER3 474 aa24.57■■□□□ 1.52
FAM228B-208ENST00000613899 ZNF560Q96MR9 790 aa24.57■■□□□ 1.52
FAM228B-208ENST00000613899 FGFBP2Q9BYJ0 223 aa24.57■■□□□ 1.52
FAM228B-208ENST00000613899 CEP72Q9P209 647 aa24.57■■□□□ 1.52
FAM228B-208ENST00000613899 EPHA5P54756 1037 aa24.56■■□□□ 1.52
FAM228B-208ENST00000613899 SV2CQ496J9 727 aa24.56■■□□□ 1.52
FAM228B-208ENST00000613899 METTL23Q86XA0 190 aa24.56■■□□□ 1.52
FAM228B-208ENST00000613899 TCEAL4Q96EI5 215 aa24.56■■□□□ 1.52
FAM228B-208ENST00000613899 TRIM9Q9C026 710 aa24.56■■□□□ 1.52
FAM228B-208ENST00000613899 MAGEF1Q9HAY2 307 aa24.56■■□□□ 1.52
FAM228B-208ENST00000613899 RBAKQ9NYW8 714 aaPredicted RBP24.56■■□□□ 1.52
FAM228B-208ENST00000613899 MTMR11A4FU01 709 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 KIAA0391O15091 583 aaKnown RBP24.55■■□□□ 1.52
FAM228B-208ENST00000613899 EXTL3O43909 919 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 PRPF6O94906 941 aaKnown RBP24.55■■□□□ 1.52
FAM228B-208ENST00000613899 VNN2O95498 520 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 PNPLA4P41247 253 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 CCR2P41597 374 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 ALDH1A3P47895 512 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 EPHB3P54753 998 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 DUSP4Q13115 394 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 ATL3Q6DD88 541 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 SHC4Q6S5L8 630 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 DTWD2Q8NBA8 298 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 ELSPBP1Q96BH3 223 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 PYM1Q9BRP8 204 aaKnown RBP24.55■■□□□ 1.52
FAM228B-208ENST00000613899 HSFX1Q9UBD0 423 aa24.55■■□□□ 1.52
FAM228B-208ENST00000613899 CYB561D2O14569 222 aa24.54■■□□□ 1.52
FAM228B-208ENST00000613899 MYL4P12829 197 aa24.54■■□□□ 1.52
FAM228B-208ENST00000613899 STARD6P59095 220 aa24.54■■□□□ 1.52
FAM228B-208ENST00000613899 ASIC1P78348 528 aa24.54■■□□□ 1.52
FAM228B-208ENST00000613899 TFAMQ00059 246 aaKnown RBP24.54■■□□□ 1.52
FAM228B-208ENST00000613899 PRKCQQ04759 706 aa24.54■■□□□ 1.52
FAM228B-208ENST00000613899 CENPPQ6IPU0 288 aa24.54■■□□□ 1.52
FAM228B-208ENST00000613899 HS6ST3Q8IZP7 471 aa24.54■■□□□ 1.52
FAM228B-208ENST00000613899 CACTINQ8WUQ7 758 aaKnown RBP24.54■■□□□ 1.52
FAM228B-208ENST00000613899 CBWD1Q9BRT8 395 aa24.54■■□□□ 1.52
FAM228B-208ENST00000613899 CRISPLD1Q9H336 500 aa24.54■■□□□ 1.52
FAM228B-208ENST00000613899 MIA3Q5JRA6 1907 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 KPNA7A9QM74 516 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 MLF2Q15773 248 aaPredicted RBP24.53■■□□□ 1.52
FAM228B-208ENST00000613899 FOXD4L6Q3SYB3 417 aaPredicted RBP24.53■■□□□ 1.52
FAM228B-208ENST00000613899 CNNM4Q6P4Q7 775 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 FOXD4L3Q6VB84 417 aaPredicted RBP24.53■■□□□ 1.52
FAM228B-208ENST00000613899 THEM5Q8N1Q8 247 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 GPD1LQ8N335 351 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 OR10T2Q8NGX3 314 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 TMEM209Q96SK2 561 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 ZFP14Q9HCL3 533 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 CFAP45Q9UL16 551 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 SIT1Q9Y3P8 196 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 ASB3Q9Y575 518 aa24.53■■□□□ 1.52
FAM228B-208ENST00000613899 TULP1O00294 542 aaPredicted RBP24.52■■□□□ 1.52
FAM228B-208ENST00000613899 EIF3DO15371 548 aaKnown RBP eCLIP24.52■■□□□ 1.52
FAM228B-208ENST00000613899 FCARP24071 287 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 ME1P48163 572 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 WNT7BP56706 349 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 SNW1Q13573 536 aaKnown RBP24.52■■□□□ 1.52
FAM228B-208ENST00000613899 FAM78AQ5JUQ0 283 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 TANGO2Q6ICL3 276 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 ATAD1Q8NBU5 361 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 ZSWIM2Q8NEG5 633 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 PJA1Q8NG27 643 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 NOC3LQ8WTT2 800 aaKnown RBP24.52■■□□□ 1.52
FAM228B-208ENST00000613899 ASB16Q96NS5 453 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 GPR88Q9GZN0 384 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 ZCWPW1Q9H0M4 648 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 DNAJC25Q9H1X3 360 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 PCIF1Q9H4Z3 704 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 FAM13BQ9NYF5 915 aa24.52■■□□□ 1.52
FAM228B-208ENST00000613899 GOLGA8IPA6NC78 632 aa24.51■■□□□ 1.51
FAM228B-208ENST00000613899 GOLGA8JA6NMD2 632 aa24.51■■□□□ 1.51
FAM228B-208ENST00000613899 POLR2BP30876 1174 aaKnown RBP24.51■■□□□ 1.51
FAM228B-208ENST00000613899 SMARCB1Q12824 385 aa24.51■■□□□ 1.51
FAM228B-208ENST00000613899 ANGPT1Q15389 498 aa24.51■■□□□ 1.51
FAM228B-208ENST00000613899 SLC39A12Q504Y0 691 aa24.51■■□□□ 1.51
FAM228B-208ENST00000613899 SLC44A4Q53GD3 710 aa24.51■■□□□ 1.51
FAM228B-208ENST00000613899 WSCD1Q658N2 575 aa24.51■■□□□ 1.51
FAM228B-208ENST00000613899 POTEHQ6S545 545 aa24.51■■□□□ 1.51
FAM228B-208ENST00000613899 ITIH5Q86UX2 942 aa24.51■■□□□ 1.51
FAM228B-208ENST00000613899 C2orf15Q8WU43 125 aaKnown RBP24.51■■□□□ 1.51
FAM228B-208ENST00000613899 ITGA11Q9UKX5 1188 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms