RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 TMEM173Q86WV6 379 aaPredicted RBP15.75■□□□□ 0.11
CD48-203ENST00000613788 METTL23Q86XA0 190 aa15.75■□□□□ 0.11
CD48-203ENST00000613788 ARHGEF19Q8IW93 802 aa15.75■□□□□ 0.11
CD48-203ENST00000613788 TMEM86AQ8N2M4 240 aa15.75■□□□□ 0.11
CD48-203ENST00000613788 TTC39CQ8N584 583 aa15.75■□□□□ 0.11
CD48-203ENST00000613788 PUF60Q9UHX1 559 aaKnown RBP15.75■□□□□ 0.11
CD48-203ENST00000613788 DNAJC12Q9UKB3 198 aa15.75■□□□□ 0.11
CD48-203ENST00000613788 PCDHB8Q9UN66 801 aa15.75■□□□□ 0.11
CD48-203ENST00000613788 POLIQ9UNA4 740 aa15.75■□□□□ 0.11
CD48-203ENST00000613788 COLQQ9Y215 455 aaPredicted RBP15.75■□□□□ 0.11
CD48-203ENST00000613788 C5orf67F2Z3F1 127 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 I3L4J1 428 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 SYN3O14994 580 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 TACC1O75410 805 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 FGF18O76093 207 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 NOL4O94818 638 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 TYMPP19971 482 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 ASPAP45381 313 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 ERVK-21P61565 698 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 APBA1Q02410 837 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 TAP1Q03518 808 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 SOWAHAQ2M3V2 549 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 LRIT3Q3SXY7 679 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 FAM171A1Q5VUB5 890 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 PPP2R2DQ66LE6 453 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 SMYD5Q6GMV2 418 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 CACNA2D4Q7Z3S7 1137 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 DDX53Q86TM3 631 aaKnown RBP15.74■□□□□ 0.11
CD48-203ENST00000613788 KLHL23Q8NBE8 558 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 SPATA18Q8TC71 538 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 C17orf80Q9BSJ5 609 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 BCO2Q9BYV7 579 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 GPR62Q9BZJ7 368 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 EDEM3Q9BZQ6 932 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 GANQ9H2C0 597 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 NKX2-4Q9H2Z4 354 aa15.74■□□□□ 0.11
CD48-203ENST00000613788 CYP11A1P05108 521 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 WEE2P0C1S8 567 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 DNAJB2P25686 324 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 CDC25BP30305 580 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 POLR2FP61218 127 aaKnown RBP15.73■□□□□ 0.11
CD48-203ENST00000613788 TRIM14Q14142 442 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 USP41Q3LFD5 358 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 GJB7Q6PEY0 223 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 SCARA5Q6ZMJ2 495 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.73■□□□□ 0.11
CD48-203ENST00000613788 LIMS2Q7Z4I7 341 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.73■□□□□ 0.11
CD48-203ENST00000613788 DRC7Q8IY82 874 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 BCL7CQ8WUZ0 217 aaPredicted RBP15.73■□□□□ 0.11
CD48-203ENST00000613788 C11orf84Q9BUA3 381 aaPredicted RBP15.73■□□□□ 0.11
CD48-203ENST00000613788 STK33Q9BYT3 514 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 DNAI2Q9GZS0 605 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 CEP72Q9P209 647 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 L1RE1Q9UN81 338 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 ARHGEF15O94989 841 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 EFEMP2O95967 443 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 SOD2P04179 222 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 TPM1P09493 284 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 LHX1P48742 406 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 CDH8P55286 799 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 RAPGEF1Q13905 1077 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 ARHGAP44Q17R89 818 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 WSCD1Q658N2 575 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 IQCEQ6IPM2 695 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 KIAA1841Q6NSI8 718 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 TMC6Q7Z403 805 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 PPFIBP1Q86W92 1011 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 CEP57Q86XR8 500 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 ADGRF2Q8IZF7 708 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 PDCL2Q8N4E4 241 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 ZNF397Q8NF99 534 aaPredicted RBP15.73■□□□□ 0.11
CD48-203ENST00000613788 TIFAQ96CG3 184 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 SPAG5Q96R06 1193 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 TTPALQ9BTX7 342 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 NAA15Q9BXJ9 866 aaKnown RBP15.73■□□□□ 0.11
CD48-203ENST00000613788 SNX25Q9H3E2 840 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 SMYD3Q9H7B4 428 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 NLRC4Q9NPP4 1024 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 LZTS1Q9Y250 596 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 TIMM13Q9Y5L4 95 aaPredicted RBP15.73■□□□□ 0.11
CD48-203ENST00000613788 FHOD1Q9Y613 1164 aa15.73■□□□□ 0.11
CD48-203ENST00000613788 SCN1AP35498 2009 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 A0A1W2PQJ5 194 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 EPHB6O15197 1021 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 FGFR3P22607 806 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 WARSP23381 471 aaKnown RBP15.72■□□□□ 0.11
CD48-203ENST00000613788 TKTP29401 623 aaKnown RBP15.72■□□□□ 0.11
CD48-203ENST00000613788 GNL1P36915 607 aaPredicted RBP15.72■□□□□ 0.11
CD48-203ENST00000613788 YWHAHQ04917 246 aaPredicted RBP15.72■□□□□ 0.11
CD48-203ENST00000613788 UBE3AQ05086 875 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 BMS1Q14692 1282 aaKnown RBP15.72■□□□□ 0.11
CD48-203ENST00000613788 OVOS1Q6IE37 1185 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 PDXDC1Q6P996 788 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 RNF168Q8IYW5 571 aaPredicted RBP15.72■□□□□ 0.11
CD48-203ENST00000613788 THEM5Q8N1Q8 247 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 FBXO22Q8NEZ5 403 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 OR6B3Q8NGW1 331 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 KAT5Q92993 513 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 KREMEN1Q96MU8 473 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms