RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 PSMC2P35998 433 aaKnown RBP12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 KCNQ1P51787 676 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 CREMQ03060 361 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 LEXMQ3ZCV2 418 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 C1orf220Q5T0J3 134 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 KLHL10Q6JEL2 608 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 DSTYKQ6XUX3 929 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 PALB2Q86YC2 1186 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 LRRC52Q8N7C0 313 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 TMC2Q8TDI7 906 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 CASP10Q92851 521 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 SENP8Q96LD8 212 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 ZNF560Q96MR9 790 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 TSG101Q99816 390 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 MKNK1Q9BUB5 465 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 BACE2Q9Y5Z0 518 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 C5orf42Q9H799 3197 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 CETN3O15182 167 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 TGM5O43548 720 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 OAZ2O95190 189 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 OR1D2P34982 312 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 PNPLA4P41247 253 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 VAMP7P51809 220 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 MRPS5P82675 430 aaKnown RBP12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 RBP5P82980 135 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 FKBP3Q00688 224 aaKnown RBP12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 YWHAHQ04917 246 aaPredicted RBP12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 BFSP1Q12934 665 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 CLUL1Q15846 466 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 SV2CQ496J9 727 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 SLC8B1Q6J4K2 584 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 TTI2Q6NXR4 508 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 ANKRD54Q6NXT1 300 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 LILRA6Q6PI73 481 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 SYCE2Q6PIF2 218 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 INTS8Q75QN2 995 aaKnown RBP12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 FAM186BQ8IYM0 893 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 SMRP1Q8NCR6 262 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 APPL2Q8NEU8 664 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 NELFBQ8WX92 580 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 ASB2Q96Q27 587 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 DUSP9Q99956 384 aaKnown RBP12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 CTNND2Q9UQB3 1225 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 CDY1Q9Y6F8 540 aa12.2□□□□□ -0.46
CCL3L3-201ENST00000612839 CYB561D2O14569 222 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 IKBKBO14920 756 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 MBD3O95983 291 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 GLUD1P00367 558 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 C1RP00736 705 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 C4BPAP04003 597 aaKnown RBP12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 CYP11A1P05108 521 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 SPATA31D3P0C874 917 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 SRGAP2BP0DMP2 458 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 ODC1P11926 461 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 TYMPP19971 482 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 ENPEPQ07075 957 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 PAK1Q13153 545 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 RAB33AQ14088 237 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 AAK1Q2M2I8 961 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 TDRD10Q5VZ19 366 aaKnown RBP12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 ZNF280DQ6N043 979 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 FOXR2Q6PJQ5 311 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 RBM43Q6ZSC3 357 aaKnown RBP12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 SPATA31D4Q6ZUB0 917 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 FEZF2Q8TBJ5 459 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 MAN1C1Q9NR34 630 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 CD207Q9UJ71 328 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 FBXL5Q9UKA1 691 aa12.19□□□□□ -0.46
CCL3L3-201ENST00000612839 TCF20Q9UGU0 1960 aaKnown RBP12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 H7C4K7 107 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 TRIM49P0CI25 452 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 TRIM49CP0CI26 452 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 HOXB8P17481 243 aaPredicted RBP12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 AP3M2P53677 418 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 STX17P56962 302 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 LSM11P83369 360 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 ROR1Q01973 937 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 PPP3CAQ08209 521 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 DPCR1Q3MIW9 517 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 ZACNQ401N2 412 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 CTXN3Q4LDR2 81 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 WSCD1Q658N2 575 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 OVOS1Q6IE37 1185 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 C15orf39Q6ZRI6 1047 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 SV2AQ7L0J3 742 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 USP37Q86T82 979 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 HPDLQ96IR7 371 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 MED15Q96RN5 788 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 S1PR5Q9H228 398 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 GDAP2Q9NXN4 497 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 SNX9Q9Y5X1 595 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 C2orf16Q68DN1 1984 aa12.18□□□□□ -0.46
CCL3L3-201ENST00000612839 BICDL2A1A5D9 508 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 ARHGEF37A1IGU5 675 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 WDR27A2RRH5 827 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 GRXCR2A6NFK2 248 aa12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 SLC16A3O15427 465 aaKnown RBP12.17□□□□□ -0.46
CCL3L3-201ENST00000612839 MBTPS2O43462 519 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms