RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 ZNF280DQ6N043 979 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 SYT13Q7L8C5 426 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 PIP4P1Q86T03 277 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 BLIDQ8IZY5 108 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 CCDC86Q9H6F5 360 aaKnown RBP11.29□□□□□ -0.6
SSX3-204ENST00000612497 GPRC5CQ9NQ84 441 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 ANKEF1Q9NU02 776 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 CELSR3Q9NYQ7 3312 aa11.29□□□□□ -0.6
SSX3-204ENST00000612497 MYO16Q9Y6X6 1858 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 SMIM28A0A1B0GU29 152 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 USO1O60763 962 aaKnown RBP11.28□□□□□ -0.6
SSX3-204ENST00000612497 DRD1P21728 446 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 BCKDHBP21953 392 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 ALDH1A3P47895 512 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 AMPD2Q01433 879 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 PSMD2Q13200 908 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 SEMA3BQ13214 749 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 RUNX3Q13761 415 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 ZNF423Q2M1K9 1284 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 ADCK5Q3MIX3 580 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 CDCA2Q69YH5 1023 aaPredicted RBP11.28□□□□□ -0.6
SSX3-204ENST00000612497 GAREM2Q75VX8 874 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 HDDC3Q8N4P3 179 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 APPL2Q8NEU8 664 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 TSTD1Q8NFU3 115 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 HAS1Q92839 578 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 ACDQ96AP0 544 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 PGLYRP2Q96PD5 576 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 ESYT1Q9BSJ8 1104 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 TPSD1Q9BZJ3 242 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 SMG9Q9H0W8 520 aaKnown RBP11.28□□□□□ -0.6
SSX3-204ENST00000612497 DNAJC25Q9H1X3 360 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 C2orf40Q9H1Z8 148 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 EBF3Q9H4W6 596 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 FBRSL1Q9HCM7 1045 aaKnown RBP11.28□□□□□ -0.6
SSX3-204ENST00000612497 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
SSX3-204ENST00000612497 EVLQ9UI08 416 aaPredicted RBP11.28□□□□□ -0.6
SSX3-204ENST00000612497 PLXNB3Q9ULL4 1909 aa11.27□□□□□ -0.6
SSX3-204ENST00000612497 CITO14578 2027 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 OTOL1A6NHN0 477 aaPredicted RBP11.27□□□□□ -0.61
SSX3-204ENST00000612497 M0R2N6 131 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 ACKR2O00590 384 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 FGF19O95750 216 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 ENGP17813 658 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 U2AF2P26368 475 aaKnown RBP eCLIP11.27□□□□□ -0.61
SSX3-204ENST00000612497 GABRR2P28476 465 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 MARCKSP29966 332 aaPredicted RBP11.27□□□□□ -0.61
SSX3-204ENST00000612497 MCM4P33991 863 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 RARRES1P49788 294 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 GALK1P51570 392 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 ATXN3P54252 364 aaPredicted RBP11.27□□□□□ -0.61
SSX3-204ENST00000612497 YARSP54577 528 aaKnown RBP11.27□□□□□ -0.61
SSX3-204ENST00000612497 FAM193AP78312 1265 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 DUSP4Q13115 394 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 NTRK3Q16288 839 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 FBXO43Q4G163 708 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 TRIM68Q6AZZ1 485 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 Q6ZUG5 572 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 KRT25Q7Z3Z0 450 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 RAB44Q7Z6P3 723 aaPredicted RBP11.27□□□□□ -0.61
SSX3-204ENST00000612497 DNAJB7Q7Z6W7 309 aaPredicted RBP11.27□□□□□ -0.61
SSX3-204ENST00000612497 DDX12PQ92771 950 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 BRF1Q92994 677 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 CHFRQ96EP1 664 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 EIF2AK1Q9BQI3 630 aaKnown RBP11.27□□□□□ -0.61
SSX3-204ENST00000612497 FAM83CQ9BQN1 747 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 HPS4Q9NQG7 708 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 CACNA2D2Q9NY47 1150 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 RAXQ9Y2V3 346 aa11.27□□□□□ -0.61
SSX3-204ENST00000612497 A0A087WWV3 80 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 UPK3BL1B0FP48 263 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 UPK3BL2E5RIL1 263 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 CCNT1O60563 726 aaKnown RBP11.26□□□□□ -0.61
SSX3-204ENST00000612497 LYPLA2O95372 231 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 BAG4O95429 457 aaKnown RBP11.26□□□□□ -0.61
SSX3-204ENST00000612497 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
SSX3-204ENST00000612497 OR4Q2P0C623 313 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 CPA1P15085 419 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 GCFC2P16383 781 aaKnown RBP11.26□□□□□ -0.61
SSX3-204ENST00000612497 IFNAR1P17181 557 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 CYP4F8P98187 520 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 ANO7Q6IWH7 933 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 ARMCX6Q7L4S7 300 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 APBB1IPQ7Z5R6 666 aaPredicted RBP11.26□□□□□ -0.61
SSX3-204ENST00000612497 NEK8Q86SG6 692 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 TRIM22Q8IYM9 498 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 DEPTORQ8TB45 409 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 PIGOQ8TEQ8 1089 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 EXOC4Q96A65 974 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 SUSD3Q96L08 255 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 TBC1D32Q96NH3 1257 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 P2RY13Q9BPV8 354 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 POLR3CQ9BUI4 534 aaPredicted RBP11.26□□□□□ -0.61
SSX3-204ENST00000612497 GTPBP2Q9BX10 602 aaKnown RBP11.26□□□□□ -0.61
SSX3-204ENST00000612497 CRISPLD1Q9H336 500 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 TASP1Q9H6P5 420 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 TOPORSQ9NS56 1045 aaPredicted RBP11.26□□□□□ -0.61
SSX3-204ENST00000612497 CIZ1Q9ULV3 898 aaPredicted RBP11.26□□□□□ -0.61
SSX3-204ENST00000612497 SLC27A5Q9Y2P5 690 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms