RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NME8Q8N427 588 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 PPM1NQ8N819 430 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 ZBTB45Q96K62 511 aaPredicted RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 P2RX7Q99572 595 aaKnown RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 ASTN2O75129 1339 aaPredicted RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 CYP1A2P05177 515 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 NUDT17P0C025 328 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 IRX4P78413 519 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 PDE1BQ01064 536 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 ITIH4Q14624 930 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 ERMARDQ5T6L9 678 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 SAMD3Q8N6K7 520 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 MAML1Q92585 1016 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 KLF6Q99612 283 aaPredicted RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 MTMR12Q9C0I1 747 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 KDM4CQ9H3R0 1056 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 ZFP69BQ9UJL9 534 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 SMG5Q9UPR3 1016 aaKnown RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 TOGARAM1Q9Y4F4 1720 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 GRIN2DO15399 1336 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 IRS2Q9Y4H2 1338 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 TCRBV7S2A1N4TA0A589 114 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 ATP5HO75947 161 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 KRT37O76014 449 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 TAF11Q15544 211 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 FKBP1CQ5VVH2 108 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 DAB2IPQ5VWQ8 1189 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 YTHDF3Q7Z739 585 aaKnown RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 APOBEC3FQ8IUX4 373 aaKnown RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 EXD1Q8NHP7 514 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 CFAP61Q8NHU2 1237 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 RNF34Q969K3 372 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 ERP27Q96DN0 273 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 SPATA33Q96N06 139 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 NAALADL1Q9UQQ1 740 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 TAF1P21675 1872 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 CACNA1SQ13698 1873 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 SRRM3A6NNA2 597 aaPredicted RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 IGF2BP3O00425 579 aaKnown RBP eCLIP9.16□□□□□ -0.94
LIG4-204ENST00000611712 COPEO14579 308 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 ESRRAP11474 423 aaPredicted RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 RFC5P40937 340 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 NAMPTP43490 491 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 AUHQ13825 339 aaKnown RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 RRP1BQ14684 758 aaKnown RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 QPCTQ16769 361 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 C1orf228Q6PIY5 440 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 C3orf62Q6ZUJ4 267 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 ZSWIM2Q8NEG5 633 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 TMEM59LQ9UK28 342 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 STXBP5LQ9Y2K9 1186 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 TTLL3Q9Y4R7 772 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 ARHGAP42A6NI28 874 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 YDJCA8MPS7 323 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 ASAP2O43150 1006 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 UBOX5O94941 541 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 HSD17B4P51659 736 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 ROR1Q01973 937 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 KCNT1Q5JUK3 1230 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 ANO5Q75V66 913 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 VSIG10LQ86VR7 867 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 C12orf56Q8IXR9 622 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 DAW1Q8N136 415 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 PDCD7Q8N8D1 485 aaKnown RBP9.15□□□□□ -0.94
LIG4-204ENST00000611712 CCNYQ8ND76 341 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 ZNF606Q8WXB4 792 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 CGRRF1Q99675 332 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 KLC2Q9H0B6 622 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 AVENQ9NQS1 362 aaPredicted RBP9.15□□□□□ -0.94
LIG4-204ENST00000611712 COL20A1Q9P218 1284 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 PSMC3IPQ9P2W1 217 aaPredicted RBP9.15□□□□□ -0.94
LIG4-204ENST00000611712 CTNNAL1Q9UBT7 734 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 MYH14Q7Z406 1995 aaKnown RBP9.15□□□□□ -0.94
LIG4-204ENST00000611712 KLRG2A4D1S0 409 aaPredicted RBP9.15□□□□□ -0.94
LIG4-204ENST00000611712 CAPN9O14815 690 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 PLSCR1O15162 318 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 EDIL3O43854 480 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 LPXNO60711 386 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 PHKA2P46019 1235 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 BCAR1P56945 870 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 MRPS9P82933 396 aaKnown RBP9.15□□□□□ -0.94
LIG4-204ENST00000611712 TMPRSS15P98073 1019 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 MXD4Q14582 209 aaPredicted RBP9.15□□□□□ -0.94
LIG4-204ENST00000611712 ZNF354CQ86Y25 554 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 CCDC60Q8IWA6 550 aaPredicted RBP9.15□□□□□ -0.94
LIG4-204ENST00000611712 OR6B3Q8NGW1 331 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 PPP4R1Q8TF05 950 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 PRPF31Q8WWY3 499 aaKnown RBP9.15□□□□□ -0.94
LIG4-204ENST00000611712 CDKL2Q92772 493 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 TMEM121Q9BTD3 319 aa9.15□□□□□ -0.94
LIG4-204ENST00000611712 BAG2O95816 211 aa9.15□□□□□ -0.95
LIG4-204ENST00000611712 RBP3P10745 1247 aa9.15□□□□□ -0.95
LIG4-204ENST00000611712 MYL6P60660 151 aa9.15□□□□□ -0.95
LIG4-204ENST00000611712 LLGL2Q6P1M3 1020 aa9.15□□□□□ -0.95
LIG4-204ENST00000611712 TRIM42Q8IWZ5 723 aa9.15□□□□□ -0.95
LIG4-204ENST00000611712 ZC3H3Q8IXZ2 948 aaKnown RBP9.15□□□□□ -0.95
LIG4-204ENST00000611712 RIBC1Q8N443 379 aaPredicted RBP9.15□□□□□ -0.95
LIG4-204ENST00000611712 NOD2Q9HC29 1040 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms